Pairwise Alignments

Query, 558 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

Subject, 564 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  134 bits (337), Expect = 9e-36
 Identities = 132/494 (26%), Positives = 214/494 (43%), Gaps = 31/494 (6%)

Query: 50  RWSHDDLWAQANAVARSLVACGVGKGTRVGVLMTNRPEFLSAVFGVALAGGVAATLSTFS 109
           +W++ +L  Q +       + GV  GTRVG+ + N P ++   +GV  AGG+    +   
Sbjct: 48  KWTYRELGEQIDRACAGFQSLGVEPGTRVGLCLPNTPYYIICYYGVLKAGGIVVNFNPLY 107

Query: 110 TPAELDHLVQSSACSVLL-LERNVLKKDFGAILAD--LEPAIGVAGEGRLVSTR---FPF 163
              EL  LV+ S  ++++ L+   +     A+L D  LE  +  +    L S +   F  
Sbjct: 108 VERELRELVEDSGTTLMVTLDLRQIYPKVAALLGDTALERIVVCSMSAILPSVKSLLFSV 167

Query: 164 LRHLAAVDGAMGRME-GWNDFLARGDAVDQALVDAAAATVMPADPGVLFFSSGSTAKPKG 222
           L+     D    R   G+   +A         +D A A        VL ++ G+T  PKG
Sbjct: 168 LKRSELADVPTDRRHIGFAKLIATKTPPRPVAIDPATAV------AVLQYTGGTTGLPKG 221

Query: 223 IISAH---RGPTLQLWRWKRFLQAK-PDARAWSANGFFWSGNFCMAIGGALTGGGSLILQ 278
            +  H    G   Q+  W  F +A+  + +  +   FF      +A+  AL  G  LIL 
Sbjct: 222 AMLTHANVTGNLTQILGW--FPEARWGEEKMLAVLPFFHVFAMTVAMNVALALGAELILL 279

Query: 279 QTFQPAEALSLMEAEKATMAFAWPHQWAQLEAAPNWADVDLSSL-YYVNPANPLGRHPTV 337
             F     L  +  +K T+    P  ++ +  A      DLSSL + ++   PL     V
Sbjct: 280 PRFDLETVLKTIARKKPTLFPGVPTIYSAIIGAVAKTPYDLSSLRFCLSGGAPLPIE--V 337

Query: 338 STDWQE-----PMAAYGNTETFTISSIFPSGTPEERIAGSHGAPLPGNIFKIVDPLTGA- 391
            T ++E      +  YG +E   +    P     +   GS G PLPG   +I   L  A 
Sbjct: 338 KTRFEELTGCTLIEGYGLSEASPVVCCNPLDGAIK--PGSIGQPLPGTTVEIRSVLDPAL 395

Query: 392 VVPLGERGEIAVKGPTLMLGYVGIPLD-DSVDGEGFFRTGDGGWFDTEGRLHWEGRLNDI 450
           +VP GERGEI V+GP +M GY   P D +    +G  RTGD G+ D EG +    R+ D+
Sbjct: 396 IVPRGERGEICVRGPQVMAGYWRRPQDTEDTFIDGALRTGDIGYIDDEGYVFLVDRIKDV 455

Query: 451 IKTGGANVSPIEIDSVIKTCPGVKVTQTVGVPHETLGELVVTCIVPHADATLDEDGIRGF 510
           I  GG NV P  I+  +     V     +G+P +  GE     +      +   + ++ +
Sbjct: 456 ILCGGYNVYPRIIEEALYQHEAVAEAVVIGLPDDYRGEAPKAFVRLRDGHSATPEDLKTY 515

Query: 511 AREQLASFKVPRRV 524
              Q++  ++P+ +
Sbjct: 516 LATQISRIEMPKTI 529