Pairwise Alignments

Query, 558 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

Subject, 569 a.a., acyl-CoA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  140 bits (353), Expect = 1e-37
 Identities = 135/507 (26%), Positives = 215/507 (42%), Gaps = 36/507 (7%)

Query: 64  ARSLVACGVGKGTRVGVLMTNRPEFLSAVFGVALAGGVAATLSTFSTPAELDHLVQSSAC 123
           A  L   GVG+G  V V M N P+F  A  G+   G V   +S  S   EL H +  S  
Sbjct: 72  ANVLRGLGVGQGDGVAVFMPNCPQFHIAFLGILKCGAVHMPVSPLSKEMELRHQLGDSQP 131

Query: 124 SVLLLERNVLKKDFGAILADLEPAIGVAGEGRLVSTRFPFLRHLAAVDGAMGRMEGWNDF 183
            V L         + A+L  + P     G   +++T +  +R  A         E     
Sbjct: 132 KVALC--------YDALLPTMRPVCQELGIEHIITTSYTDVRPRAITAVLPDLFEIPKTP 183

Query: 184 LARG-----DAVDQALVDAAAATVMPADPGVLFFSSGSTAKPKGIISAHRGP--TLQLWR 236
           LA G     +A+D A  +         D   + ++SG+T  PKG++  HR    T+  + 
Sbjct: 184 LADGIIDFFEAIDNASKEVLDYIPALDDLAAINYTSGTTGMPKGVMHTHRNMIGTMASYY 243

Query: 237 WKRFLQAKPDARAWSANGF---FWSGNFCMAIGGALTGGGSLILQQTFQPAEALSLMEAE 293
              F +  P+        F   FW       +   L  G +L+L   +     + L+   
Sbjct: 244 PVTFGEVGPEGTDLVMLSFLPEFWIAGEDTGLLLPLYSGATLVLMARWDTKAFMELVHHH 303

Query: 294 KATMAFAWPHQWAQLEAAPNWADVDLSSLYYVNPANPLGR-HPTVSTDWQEPMA------ 346
           K  M         ++   P+    DL+SL  V   + + + +      W+E         
Sbjct: 304 KVNMTIMLIDSVDEILNHPHLHQFDLTSLTTVPCISFIKKLNRDYRQRWRELTGTTLFEV 363

Query: 347 AYGNTETFTISSIFPSGTPEERIAGSH-----GAPLPGNIFKIVDPLTGAVVPLGERGEI 401
           AYG TET T  + F  G   + +  S      G P+PG   KI D +TG ++PLG  GEI
Sbjct: 364 AYGMTETHTCDT-FTRGFQVDDMDLSFDPAFLGLPVPGTEIKICDFVTGELMPLGVEGEI 422

Query: 402 AVKGPTLMLGYVGIP-LDDSVDGEG-FFRTGDGGWFDTEGRLHWEGRLNDIIKTGGANVS 459
            ++ PTL+ GY   P L+ ++  EG ++RTGD G    EG   + GR  +++K  G +V 
Sbjct: 423 QIRTPTLLKGYWNKPDLNKNLFEEGGWYRTGDLGMITEEGFFRYLGRRKEMLKVNGMSVF 482

Query: 460 PIEIDSVIKTCPGVKVTQTVGVPHETLGELVVTCIVPHADATLDEDGIRGFAREQLASFK 519
           P E++S++   P +     VG P E  G++ V  +         ++ ++ +    +A FK
Sbjct: 483 PTEVESMLGQHPAIASCGVVGRPDERKGQVPVAFVTLKPGFDETQESLQAWCVNAMAIFK 542

Query: 520 VPRRVLFFAESDLELTGSAKIKTADLK 546
           VP       +  L +T + KI+  DL+
Sbjct: 543 VPE---IRIQERLPMTATGKIRKVDLE 566