Pairwise Alignments

Query, 558 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  202 bits (515), Expect = 2e-56
 Identities = 149/543 (27%), Positives = 263/543 (48%), Gaps = 16/543 (2%)

Query: 22  TLGGWLREVTQAHAGREALVFHGPDGVVRWSHDDLWAQANAVARSLVACGVGKGTRVGVL 81
           T+G +  +  Q    RE LV+  PD  +R+++ +   + + +A+ L+  G+ KG  +G+ 
Sbjct: 7   TIGEFFEKQAQKDPDREFLVY--PDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIW 64

Query: 82  MTNRPEFLSAVFGVALAGGVAATLSTFSTPAELDHLVQSSACSVLLLERNVLKKDFGAIL 141
             N P++L+ +F  A  G V  T++T     EL ++++ S    L +  +    ++  IL
Sbjct: 65  ARNVPDWLTFMFATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEIL 124

Query: 142 ADLEPAIGVAGEGRLVSTRFPFLRHLAAVDGAMGR-MEGWNDFLARGDAV-DQALVDAAA 199
            +L P +  +  G+L S  FP+L+++  V     R M    + +  G+ V D+ L++A  
Sbjct: 125 YELVPELKTSQRGKLNSEEFPYLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKK 184

Query: 200 ATVMPADPGV-LFFSSGSTAKPKGIISAHRGPTLQLWRWKRFLQAKPDARAWSANGFFWS 258
              + +D  + + ++SG+T  PKG++  H+      +      +   + R       F  
Sbjct: 185 G--LDSDDVINMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTEEERLCLPVPLFHC 242

Query: 259 GNFCMAIGGALTGGGSLILQQTFQPAEALSLMEAEKATMAFAWPHQWAQLEAAPNWADVD 318
               + +   LT GG+L++ + F P   L+ ++ EK T  +  P  +    + P +   D
Sbjct: 243 FGIVLGVLALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEMFD 302

Query: 319 LSSL---YYVNPANPLGRHPTVSTDW--QEPMAAYGNTETFTISSIFPSGTPEERIAGSH 373
           LSSL          P+     V +D   +E   +YG TE   + ++     P E+   S 
Sbjct: 303 LSSLRTGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVDDPFEKRVESV 362

Query: 374 GAPLPGNIFKIVDPLTGAVVPLGERGEIAVKGPTLMLGYVGIP--LDDSVDGEGFFRTGD 431
           G  +P    KI+DP TG  +  G  GEI  +G  +M GY  +P    + ++ +G+  +GD
Sbjct: 363 GKAMPHCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSGD 422

Query: 432 GGWFDTEGRLHWEGRLNDIIKTGGANVSPIEIDSVIKTCPGVKVTQTVGVPHETLGELVV 491
               D +G     GR+ D+I  GG N+ P EI+  + T PG+   Q VG+P E  GE+V 
Sbjct: 423 LAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIVG 482

Query: 492 TCIVPHADATLDEDGIRGFAREQLASFKVPRRVLFFAESDLELTGSAKIKTADLKALVVK 551
             ++P     + E+ +R FA E++A +KVP+ V  F   +  +T S KI+   L  L V+
Sbjct: 483 AFVIPKEGYEIKEEDVRDFALEKIARYKVPKHV--FVVEEFPMTASGKIQKFKLTELAVE 540

Query: 552 RLE 554
            L+
Sbjct: 541 LLK 543