Pairwise Alignments

Query, 573 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Sphingobium sp. HT1-2

Subject, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Pseudomonas stutzeri RCH2

 Score =  473 bits (1216), Expect = e-137
 Identities = 268/598 (44%), Positives = 370/598 (61%), Gaps = 38/598 (6%)

Query: 3   FRVPLVEQLFVLETIANIEGI-ASLPAFTAATP-ELIEAVLDESAKLAEQVFAPLNKIGD 60
           ++ PL +  FVL  + +   +  +LPA       E  +A+L+E+ K+     APLN+ GD
Sbjct: 4   YQAPLRDMRFVLNEVFDAPKLWQALPALAEVVDAETADAILEEAGKITANSIAPLNRSGD 63

Query: 61  IEGSVWRNGEVSLPDGYASAFRQYVAGGWGSLGSDPRWGGQGLPFVLALAVQEQLTAANM 120
            EG  W  G VS P GY  A++ Y  GGW  +G DP +GG G+P V++  V+E + +A++
Sbjct: 64  EEGCRWDAGAVSTPAGYREAYQLYAKGGWVGVGGDPAFGGMGMPKVISAQVEEMMNSASL 123

Query: 121 AFALNMMLTLGAIEALQSHASDDLNALYLTKLVSGEWTGTMNLTEPQAGSDVGALRTRAE 180
           AF L  MLT GA  ++ +HAS++L   YL  + +G W+G+M LTEP AG+D+G +RT+AE
Sbjct: 124 AFGLYPMLTSGACLSIYAHASEELKQKYLPNMYAGVWSGSMCLTEPHAGTDLGIIRTKAE 183

Query: 181 PAADGTWRIKGSKIFITWGEHDLAENIVHLVLARTPGSPAGTKGISLFLVPKFL--ED-- 236
           P ADG++++ G+KIFIT GEHDL ENI+HLVLA+ P +PAG++GISLFLVPK +  ED  
Sbjct: 184 PQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGSRGISLFLVPKVMVNEDGS 243

Query: 237 -GVRNDLRCVSIEHKLGIHASPTCTMSFGDADGCVGYMVGAENGGMRAMFTMMNHARINV 295
            G RN L C SIEHK+GI AS TC M+F   DG VG+MVG  N G+ AMFTMMN+ R+ V
Sbjct: 244 LGERNSLSCGSIEHKMGIQASATCVMNF---DGAVGWMVGEPNKGLAAMFTMMNYERLGV 300

Query: 296 GLQGVGIAERAYQAALGYARERVQGLR-------------IIDYPDVRRMILTMRATTEA 342
           G+QG+   ER+YQ+A+ YAR+R+Q                II +PDVRRM+LTM+A  E 
Sbjct: 301 GIQGLATGERSYQSAIEYARDRIQSRAPTGPVAQDKAADPIIVHPDVRRMLLTMKALNEG 360

Query: 343 IRALAYFNAAAVD-RGHSGDAQAQMLAD----LLTPVTKAYATDMGVEVASLGIQVFGGM 397
            RA + + A  +D    S D +A+  A+    LLTPV KA+ TDMG+E    G QVFGG 
Sbjct: 361 GRAFSSYVALQLDIAKFSDDDEARQRAEAQVALLTPVAKAFLTDMGLETTVHGQQVFGGH 420

Query: 398 GFIEETGAAQHFRDARIAPIYEGTNGIQAMDLVGRKLRQGRWEALFAEIATEID--LAGA 455
           GFI E G  Q  RD RI  IYEGTNGIQA+DLVGRK+  G    ++     EI   +A A
Sbjct: 421 GFIREWGQEQLVRDCRITQIYEGTNGIQALDLVGRKI-VGSGGTMYQAFVDEIRAFIADA 479

Query: 456 TPETAALQAPLEAALSALTHATKWMLDQSDA--QDVTAGASPYLRMFGILMGGYLLARQA 513
            PE      PL+AA+  L   T W++DQ+ A   ++ A +  YL +FG     Y+ AR A
Sbjct: 480 GPELTEFAEPLKAAMDNLDELTAWVIDQAKANPNEIGAASVEYLHVFGYTAYAYMWARMA 539

Query: 514 RIACERIAGGTADNLPFLRTKIATASFFITQILPQAGALLSAATAGAAPLYAISEDQF 571
            +A  +   G      F ++K+ TA F+  ++LP+  +L ++  AG+  LY +   QF
Sbjct: 540 AVAVAKREEG-----DFYQSKLGTARFYFARLLPRIHSLSASVKAGSESLYLLDAAQF 592