Pairwise Alignments

Query, 538 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  214 bits (544), Expect = 9e-60
 Identities = 163/542 (30%), Positives = 257/542 (47%), Gaps = 56/542 (10%)

Query: 42  LGDLLRRSARRFPDKAAVITPSRTI--TFGQLDEMANRCANMLRNEGAKPGDRIATICSN 99
           +G+   + A++ PD+  ++ P R +  T+ + DE  +  A  L   G K GD I     N
Sbjct: 8   IGEFFEKQAQKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARN 67

Query: 100 SIDFIIVIFGLHKAGLVWVPINPLIAADDRAYIL-----------------NHTEASFVI 142
             D++  +F   K G+V V +N    + + AY++                 N+ E  + +
Sbjct: 68  VPDWLTFMFATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYEL 127

Query: 143 ADE---------------HIQNVI------PEGAGGSPPVLALGEAFDTRLSSASPKEPD 181
             E               +++NVI        G   +  ++ LG      +S     E  
Sbjct: 128 VPELKTSQRGKLNSEEFPYLKNVIYVGQEKHRGMYNTTELMLLGNY----VSDEKLIEAK 183

Query: 182 LPIHERDLAMIMYTSGTTSRPKGVMHCNLAVYATVMCN---IGEWM-VTRKDRILIVLPL 237
             +   D+  + YTSGTT  PKGVM      +  ++ N   IGE    T ++R+ + +PL
Sbjct: 184 KGLDSDDVINMQYTSGTTGFPKGVM----LTHKNILNNGYYIGEKQKFTEEERLCLPVPL 239

Query: 238 FHVSAHCL-FTTFMAAGATVVLHNGFDPGQVAAAIEDEKVSFFVGLPMMYAAVMDHPIRM 296
           FH     L     +  G T+V+   FDP  V AAI+ EK +   G+P M+ A   HP+  
Sbjct: 240 FHCFGIVLGVLALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFE 299

Query: 297 TTDFSSLRYCIYAMAPMPGPLLRRLLSE-FCPTFVLSSGQTEMYPSTAMLRPEQQLLKEG 355
             D SSLR  I A +  P   +++++S+ +     +S G TE  P   M   +    K  
Sbjct: 300 MFDLSSLRTGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVDDPFEKRV 359

Query: 356 NYWGEPSIVNDMAIMDDD-GTLLPPGQVGEIVHRGPNVMLGYYKDEAATAHS-RRFGWHH 413
              G+     ++ I+D + G  L PG VGEI  RG NVM GYYK    TA    + GW H
Sbjct: 360 ESVGKAMPHCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLH 419

Query: 414 TGDLGVIDEDGQLLFVDRLKDIIKSGGENVASVKVEQVLLQHPSIGNAAAIGVPHPRWQE 473
           +GDL V DEDG    V R+KD+I  GGEN+   ++E+ L   P I +A  +G+P  ++ E
Sbjct: 420 SGDLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGE 479

Query: 474 AVVAVVMLKPGSTAGAQEILDHCRAALAPHEVPKAVQFVDDLPLTATSKLRKVELRDRFL 533
            V A V+ K G     +++ D     +A ++VPK V  V++ P+TA+ K++K +L +  +
Sbjct: 480 IVGAFVIPKEGYEIKEEDVRDFALEKIARYKVPKHVFVVEEFPMTASGKIQKFKLTELAV 539

Query: 534 NL 535
            L
Sbjct: 540 EL 541