Pairwise Alignments

Query, 467 a.a., DNA polymerase IV-like protein ImuB from Sphingobium sp. HT1-2

Subject, 433 a.a., Error-prone polymerase for DNA repair (imuB or polY like) (from data) from Phaeobacter inhibens DSM 17395

 Score =  199 bits (507), Expect = 1e-55
 Identities = 150/457 (32%), Positives = 208/457 (45%), Gaps = 27/457 (5%)

Query: 14  MTVTKARMLAPELEVIDALPDADMDGLRRLALWAGQRYSPIVAPDAPDGLWIDITGCASL 73
           M  + AR   P+L+   A    D   L  L  WA  RY P V  +  DGL +DI+G + L
Sbjct: 1   MAHSDARAFCPDLQTAAADIYRDQQFLLILRRWA-TRYCPWVGLEGRDGLVLDISGSSHL 59

Query: 74  FGSETALLKDLHRRIAAFGVAVHIAVADTAGCAHAVARHVRDGRPVVIEPGQHRRAMELL 133
           FG ET +L  +   +   G++  I +ADT G A A+A H  +G+      G    A++ L
Sbjct: 60  FGGETGMLNAIRNGLMRVGLSAQIGLADTRGAAWALA-HYGEGQAAT---GDMLPALQHL 115

Query: 134 PIPALRLEAEIVEGLRKLGFERVEQLLGAPRAPLAKRFGRSLHRRLDQAIGQVAEPIEPI 193
           P+ ALRL+ +    L +LG  ++  L   PRAPLA+RFG ++  RLDQA+G  AE I P+
Sbjct: 116 PVAALRLDEKTTTALIRLGLRKIGDLATTPRAPLARRFGANVLMRLDQALGHQAEEITPL 175

Query: 194 FPEQMPRAQRGFMEPIATPEAFAQVIGDLVADIVEQLARAGRGGRRLDCYFHRVDGHCQV 253
                   +    EPI            L+  +  +L     G R       RVD   Q 
Sbjct: 176 TAPPHYGVRMTLPEPIGLISDVMAGTERLLTQLCAKLKTHEMGARIFVITLRRVDLDQQE 235

Query: 254 IRIGTATPSRDAGHLAKLLCAKIETVEPGLGIEAMTLLVSLMEAAAPRQGESLEQLGRRG 313
           + +  A   RD   +  L   ++  ++ G GI+ + L  +  EA   +Q   +  +   G
Sbjct: 236 VELRLARALRDPQRILPLFEKELAEIDAGFGIDQLRLEATQTEALPTQQ---MSHVAGDG 292

Query: 314 PD-LAALVDTLANRFGSRNLHRMAPCPSGMPERSATGAPALGEARGMGWDDDLPRPARML 372
            D L  L+  +  R G  N+ R  P  S +PERS   APA   A   GW    PRP   L
Sbjct: 293 DDRLEDLITRIGTRIGLENIQRFLPADSHIPERSFIVAPAAYSATASGWTCKTPRPL-CL 351

Query: 373 AKPEPIEVIALLPDDAPRMFIWRGKRYRVTQGD--GPERLHGEWWRDGGIEGRQPLSVRD 430
             PEPI      P   P  F WR  R  +T G   GPER+  EWW +   +      +RD
Sbjct: 352 FPPEPIPGSGPYP---PNHFRWR--RVSLTTGHTIGPERITPEWWLE---DDNWRSGMRD 403

Query: 431 YYQVETVSGGRYWLFRAGDGESAATGPMRWFIHGAFA 467
           Y++VET  G R WLF              WF+ G FA
Sbjct: 404 YWRVETTQGRRLWLFYTPQNPG-------WFVQGEFA 433