Pairwise Alignments

Query, 1105 a.a., Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) from Sphingobium sp. HT1-2

Subject, 1159 a.a., DNA polymerase III subunit alpha from Vibrio cholerae E7946 ATCC 55056

 Score =  328 bits (842), Expect = 1e-93
 Identities = 286/1069 (26%), Positives = 483/1069 (45%), Gaps = 81/1069 (7%)

Query: 6    PGYVELQVTTHFSFLRGASSPEDLFATAAAMEMPALGVVDRHSVAGIVRAWDAERQTGVR 65
            P ++ L++ + FS + G S    L    AAM MPA+ + D  ++ G+V+ +      GV+
Sbjct: 4    PKFIHLRIHSDFSMVDGLSKVPPLVKKVAAMGMPAMALTDFTNLCGLVKFYSTAHNCGVK 63

Query: 66   AIVGCRLDLTDG------TALLVYPTDKAAYGRLCRLLSIGKTRAGKGACHLDWSDVAD- 118
             I+G    L         T L +   +   Y  L  L+S    R      H+    V D 
Sbjct: 64   PIIGADFTLQSEEFGDELTKLTLLAKNNVGYKNLTLLISKAYLRG-----HVQHQPVIDK 118

Query: 119  -W----NEGLLAMLVPDRADATTQAALARTKRL-----------FGERTYMALSVRRRPK 162
             W     EGL+ +L   ++    +A L   ++            F +  Y+ L    R  
Sbjct: 119  AWLVEHAEGLI-VLSGGKSGEVGRALLKGNQQQVERCIEFYQTHFADHFYLELIRTGRAD 177

Query: 163  DAIRLRDLSRIAAAAGVPTIATNDVLYHVPERRQLQDVVTCIREKCTIDTLGRTRERFAD 222
            +   L     +A    +P +ATN+V++   E  +  ++   I +  T++   R +     
Sbjct: 178  EESYLHFALDVAEQYDLPVVATNEVVFITEESFEAHEIRVAIHDGYTLEDPRRPKNYSPK 237

Query: 223  RYLKTGAEMTRLFRRYLKDSSPVARSVEFARRCAFSLDELKYQYP----------DEIQV 272
            +YL++ AEM  LF         +A SVE A+RC  ++   +Y  P          D + +
Sbjct: 238  QYLRSEAEMCELFADI---PEALANSVEIAKRCNVTVRLGEYFLPNFPTGGMAIEDFLVM 294

Query: 273  PGRTPQEELERLTWEKAPMRYPQGVDDKVRRQLEHELQLIGQLDYAPYFLTVHAIVAEAR 332
              R   EE     +    +R  +  +   R Q+E  L +I Q+ +  YFL V   +  ++
Sbjct: 295  KSREGLEERLEFLFPDPEVRAKRRPEYDERLQVE--LDVINQMGFPGYFLIVMEFIQWSK 352

Query: 333  RREI-LCQGRGSAANSAVCYVLGITSIDPVRSELLFERFVSAERREPPDIDVDFEHERRE 391
              +I +  GRGS A S V Y L IT +DP+  +LLFERF++ ER   PD DVDF  ++R+
Sbjct: 353  DNDIPVGPGRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRD 412

Query: 392  EVIQWIYETYGRTRSALTAVVTRFRARGAVREVGKALGLS---EDVTAGLAGAIWGYSRE 448
            +VI  + E YGR   +         A+  +R+VG+ LG      D  + L     G + E
Sbjct: 413  QVIDHVAEMYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLVPPDPGMTLE 472

Query: 449  G--VEEKHAQELNLDLSDTRLALTLDLARQLIDTPRHLSQHPGGFVLTRDRLDELVPIEP 506
               + E   QEL    +D  +   +D  R L    R+  +H GG V++   + +  PI  
Sbjct: 473  KAFIAEPALQELY--DADEEVKELIDKCRILEGCTRNAGKHAGGVVISPTAITDFAPIYC 530

Query: 507  AAMDDRQVIEWDKDDIDLLGFMKVDVLALGMLSCMRRAFEF----LENDKGLRHDLATIP 562
             A  +  V ++DK+D++  G +K D L L  L+ +  A       L+        +  IP
Sbjct: 531  DAEGNFPVTQFDKNDVETAGLVKFDFLGLRTLTIIDWALGLVNPRLKKAGKPPVRIEAIP 590

Query: 563  AEDPATYAMIRRADTLGVFQIESRAQMASIPLMAPKTFYDLVIQVAIVRPGPIQGDMVHP 622
             +D  ++  ++ A T  VFQ+ESR     I  + P  F D++  VA+ RPGP+Q  MV  
Sbjct: 591  LDDARSFRNLQDAKTTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDN 650

Query: 623  YRRRRNGEEEVTYPTEE-----LRRVLEKTLGVPLFQEQAMRVAIECAGFTASEADLLRR 677
            +  R++G E ++YP E+     L+ +LE T G+ L+QEQ M++A   +G+T   AD+LRR
Sbjct: 651  FIDRKHGREAISYPDEKWQHESLKEILEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRR 710

Query: 678  AMATFKLTGGVSDFRDKLISGMVSRGYDQEFAEKTFKQIEGFGSYGFPESHAASFALIAY 737
            AM   K    ++  R     G    G D E A K F  +E F  YGF +SH+A++AL++Y
Sbjct: 711  AMGK-KKPEEMAKQRAVFQEGAEKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSY 769

Query: 738  ASSWMKCHHPDAFCASLLNAQPMGFYAPAQIVRDAREHGVEIRPIDVNASRWDCTLEEGR 797
             + W+K H+P  F A+++ A          +V + +  G+ + P D+N+  +   +++  
Sbjct: 770  QTLWLKTHYPAEFMAAVMTADMDNTEKVVGLVDECKNMGLTVLPPDINSGLYRFNVDDN- 828

Query: 798  GRYKAVRLGLRMARDLANADAAAIVTARGDRP-FTSIEEIQQRAG---VGRGALDRIGDA 853
                A+  G+   + +      AI+ AR     F  + +   R     V +  ++++  A
Sbjct: 829  ---GAIVYGIGAIKGVGEGPIEAILEARNKGGYFKDLFDFCARIDLKKVNKRVIEKLILA 885

Query: 854  DGFGSLGADRRSGLWAVKGLGNAA-----LPLFAAADERAGKLR---EEAIEPTVILAEM 905
                 LG  R + + +V     AA        F  AD   G L    EE  +    + E 
Sbjct: 886  GALDRLGPHRAAMMASVDDAVRAASQHHQAEAFGQAD-MFGVLTDAPEEVEQKYTQVPEW 944

Query: 906  GEGAEVVEDYRASGLSLRAHPVAFLREELKARRMITCEQLRTTRDGRWIELAGLVLVRQK 965
             E   +  +    GL L  HPV    +EL         +   TR  + + +AGLV+  + 
Sbjct: 945  PEKVRLEGERETLGLYLTGHPVDEYLKELTKYTSCRLNEAAPTRRDQSLTVAGLVIAARV 1004

Query: 966  PGSAKG--VMFITLEDETDLANLVVWTNVFEKNRRTVLGASMMGVRGQV 1012
              + +G  +  +TL+D +    +++++   ++    +    ++ V GQV
Sbjct: 1005 MTTKRGTRIGLMTLDDRSGRMEVMLYSEALDRYAEWLEKDKILVVSGQV 1053