Pairwise Alignments

Query, 1105 a.a., Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) from Sphingobium sp. HT1-2

Subject, 1079 a.a., Probable DNA polymerase III (alpha chain) DnaE2 (DNA nucleotidyltransferase) from Mycobacterium tuberculosis H37Rv

 Score =  640 bits (1652), Expect = 0.0
 Identities = 403/1062 (37%), Positives = 562/1062 (52%), Gaps = 61/1062 (5%)

Query: 8    YVELQVTTHFSFLRGASSPEDLFATAAAMEMPALGVVDRHSVAGIVRAWDAERQTGVRAI 67
            Y EL   + +SFL GAS+PE+L   AA + + AL + D   + G VR  +A  +  VR +
Sbjct: 46   YAELHAHSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTV 105

Query: 68   VGCRLDL----------TDGTALLVYPTDKAAYGRLCRLLSIGKTRAG-KGACHLD---- 112
             G  L L            G  LLV       Y RL R L+      G KG    D    
Sbjct: 106  FGAELSLGATARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDAL 165

Query: 113  -------WSDVADWNEGLLAMLVPDRADATTQAALAR-TKRLFGERTYMALSVRRRPKDA 164
                   W  +    +G +   +     A  Q ALA    R    R  + L+    P D 
Sbjct: 166  TEAAGGHWHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDD 225

Query: 165  IRLRDLSRIAAAAGVPTIATNDVLYHVPERRQLQDVVTCIREKCTIDTLGRTRERFADRY 224
             R   L+ +A   GV  +AT    +  P R +L   +  IR + ++D+           +
Sbjct: 226  ERNAALAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAH 285

Query: 225  LKTGAEMTRLFRRYLKDSSPVARSVEFARRCAFSLDELKYQYPDEIQVPGRTPQEELERL 284
            L++G EM RLF         V  + E   RCAF L  +  + P      G T    L  L
Sbjct: 286  LRSGEEMARLFAWC---PEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSL 342

Query: 285  TWEKAPMRY-PQGVDDKVRRQLEHELQLIGQLDYAPYFLTVHAIVAEARRREILCQGRGS 343
                A  RY P     +   Q+EHEL++I QL +  YFL VH I    R  +ILCQGRGS
Sbjct: 343  VMAGARERYGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGS 402

Query: 344  AANSAVCYVLGITSIDPVRSELLFERFVSAERREPPDIDVDFEHERREEVIQWIYETYGR 403
            AANSAVCY LG+T++DPV +ELLFERF+S  R  PPDID+D E ++RE+VIQ++Y  YGR
Sbjct: 403  AANSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGR 462

Query: 404  TRSALTAVVTRFRARGAVREVGKALGLSEDVTAGLAGAI--WGYSREGVEEKHAQELNLD 461
              +A  A V  +R R AVR++ +ALG S       +  +  W    + V+    Q     
Sbjct: 463  DYAAQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQ----- 517

Query: 462  LSDTRLALTLDLARQLIDTPRHLSQHPGGFVLTRDRLDELVPIEPAAMDDRQVIEWDKDD 521
                     +DLA Q+ + PRHL  H GG V+    + ++ P+E A M +R V++WDKDD
Sbjct: 518  --------VIDLATQIRNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDD 569

Query: 522  IDLLGFMKVDVLALGMLSCMRRAFEFLENDKGLRHDLATIPAEDPATYAMIRRADTLGVF 581
               +G +K D+L LGMLS +  A + +   KG+  DLA +   +PA Y M+ RAD++GVF
Sbjct: 570  CAAIGLVKFDLLGLGMLSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVF 629

Query: 582  QIESRAQMASIPLMAPKTFYDLVIQVAIVRPGPIQGDMVHPYRRRRNGEEEVTYPTEELR 641
            Q+ESRAQMA++P + P+ FYDLV++VA++RPGPIQG  VHPY RRRNG + V Y    + 
Sbjct: 630  QVESRAQMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMA 689

Query: 642  RVLEKTLGVPLFQEQAMRVAIECAGFTASEADLLRRAMATFKLTGGVSDFRDKLISGM-V 700
              L KTLGVPLFQEQ M++A++CAGF+A+EAD LRRAM + + T  +   R +   GM  
Sbjct: 690  PALRKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRA 749

Query: 701  SRGYDQEFAEKTFKQIEGFGSYGFPESHAASFALIAYASSWMKCHHPDAFCASLLNAQPM 760
              G   E  ++ ++++E F ++GFPESHA SFA + + S+W K HHP AFCA+LL AQPM
Sbjct: 750  LHGAPDEVIDRIYEKLEAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPM 809

Query: 761  GFYAPAQIVRDAREHGVEIRPIDVNASRWDCTLEEGRGRYKAVRLGLRMARDLANADAAA 820
            GFY+P  +V DAR HGV +    VNAS    T E        VRLGL   R L    A  
Sbjct: 810  GFYSPQSLVADARRHGVAVHGPCVNASLAHATCENAG---TEVRLGLGAVRYLGAELAEK 866

Query: 821  IVTAR-GDRPFTSIEEIQQRAGVGRGALDRIGDADGFGSLGADRRSGLWAVKGLGNAALP 879
            +V  R  + PFTS+ ++  R  +    ++ +  A   G  G  RR  LWA          
Sbjct: 867  LVAERTANGPFTSLPDLTSRVQLSVPQVEALATAGALGCFGMSRREALWAAG-------- 918

Query: 880  LFAAADERAGKLREEAIEPTV-ILAEMGEGAEVVEDYRASGLSLRAHPVAFLREELKARR 938
              AAA  R  +L        +  L  M E      D  A+G+S  ++P  FLR +L A  
Sbjct: 919  --AAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSPDSYPTQFLRADLDAMG 976

Query: 939  MITCEQLRTTRDGRWIELAGLVLVRQKPGSAKGVMFITLEDETDLANLVVWTNVFEKNRR 998
            ++  E+L +  DG  + +AG V  RQ+P +A+GV FI LEDET + N++    V+ ++R+
Sbjct: 977  VLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETGMVNVLCTPGVWARHRK 1036

Query: 999  TVLGASMMGVRGQVQREGEVIHVIAQRLDDLSGMLASVGRRA 1040
                A  + +RGQVQ     I V+A+R+  L+    +VG R+
Sbjct: 1037 LAHTAPALLIRGQVQNASGAITVVAERMGRLT---LAVGARS 1075