Pairwise Alignments

Query, 443 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Sphingobium sp. HT1-2

Subject, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  118 bits (295), Expect = 6e-31
 Identities = 92/322 (28%), Positives = 151/322 (46%), Gaps = 25/322 (7%)

Query: 105 SVRGVLLPVAAANEKLTDIIWERAADDATRRRLVDIMAQVGMVDAGLMANVIAIDDAESQ 164
           + R +  P+   N +L  +    A  D TRR       + G +   +        +  SQ
Sbjct: 328 TARSIQKPLQKINHELAYM----ARGDMTRRINYPTRCEFGALSRSIDILADKTGELLSQ 383

Query: 165 RNARQQFGVLFEQRIMGEIDGASQLGESLREQAKDASAATRGMLGKASEVAAAAEQSALA 224
            NA  +        ++ E   ++++ E    + ++  + T        +VAAA  +  ++
Sbjct: 384 INAGSR-------HLVNEASRSAEISERAMARVQEQKSQT-------DQVAAAITELEVS 429

Query: 225 MREAARTSAGLIRAIEDA-------RTEVESAAEVAQRAASQSGDAVSMSATLSDHAKSI 277
             E AR++ G    ++ A       R +V +   + ++ AS    AV ++  L + + +I
Sbjct: 430 ATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSNNI 489

Query: 278 ESILGLIRDIAGQTNLLALNATIEAARAGDAGRGFAVVAQEVKSLANQTARATDEIAGKI 337
            SIL +IR IA QTNLLALNA IEAARAGDAGRGFAVVA EV++LA +T  +T+EI   I
Sbjct: 490 GSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQHMI 549

Query: 338 AAIQASTRQSVETNERIRDTVGEVQASAQRIRHAMDAQAQTVTMITAAVDETALAADSMS 397
             +Q S++Q VE   R ++         + +  A+ + A  +  I    D+ A AA    
Sbjct: 550 ENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQI 609

Query: 398 TTISAIRQDTEVVASEIDQLER 419
               ++      +A    + ER
Sbjct: 610 VVSQSVAHHVTGIAEVAHETER 631



 Score = 26.9 bits (58), Expect = 0.002
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 12/103 (11%)

Query: 182 EIDGASQLGESLR---EQAKDASAATRGMLGKASEVAAAAEQSALAMREAARTSAGLIRA 238
           E+ G SQ  E  R   EQ ++  +A + +  +   +   A+Q A A +E    S  +   
Sbjct: 561 EVMGRSQ--EQTRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAH- 617

Query: 239 IEDARTEVESAAEVAQRAASQSGDAVSMSATLSDHAKSIESIL 281
                  V   AEVA     ++ ++ S S  L+D A   + ++
Sbjct: 618 ------HVTGIAEVAHETEREARESASSSEVLADLAAKQQQLI 654