Pairwise Alignments

Query, 443 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Sphingobium sp. HT1-2

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  120 bits (300), Expect = 2e-31
 Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 31/347 (8%)

Query: 106 VRGVLLPVAAANEKLTDIIWERAADDATRRRLVDIMAQVGMVDAGLMANVIAIDDAESQR 165
           +R ++ PV   ++ ++ I    A  D T R    +  ++G +             A    
Sbjct: 289 IRSIMEPVQRISDAISRI---EATKDLTLRCDTKVDDEIGQI-------------ARHFN 332

Query: 166 NARQQFGVLFEQRIMGEIDGASQLGESLREQAKDASAATRGMLGKASEVAAAAEQSALAM 225
           +  + F  L  + ++  ++  +   + L E +  AS      L +   VA A  +    +
Sbjct: 333 SMVESFQSLIRE-VLTSVEVVNHSCQELSENSMRASEGVGRQLNETDMVATAITEMGATI 391

Query: 226 RE-AARTSAGLIRA------IEDARTEVESAAEVAQRAASQSGDAVSMSATLSDHAKSIE 278
            E A+ T     RA       +  +  VE   E  Q  A+Q  D+  + + L   +++I 
Sbjct: 392 DEIASNTELAAERAGNTHDNAQQGQVGVEHTIEKIQALAAQLTDSAQVVSELEKDSETIG 451

Query: 279 SILGLIRDIAGQTNLLALNATIEAARAGDAGRGFAVVAQEVKSLANQTARATDEIAGKIA 338
           S+L +IR IA QTNLLALNA IEAARAG+ GRGFAVVA EV+SLA +T  +T+EIAG I 
Sbjct: 452 SVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQ 511

Query: 339 AIQASTR---QSVETNERIRDTVGEVQASAQRIRHAMDAQAQTV----TMITAAVDETAL 391
            +Q+ TR   Q +E  +R      +  ASA  +   ++A    +    T I AA++E ++
Sbjct: 512 TLQSRTRSIVQLMEATQRQGIESADQAASAGALLEQINADVTNIMDMSTQIAAAIEEQSM 571

Query: 392 AADSMSTTISAIRQDTEVVASEIDQLERGFMSVEGKLSSLRHASSDF 438
            A  ++  +  IR      A   D+  +    V+ +   L  A S F
Sbjct: 572 VASEVNKNVVVIRDIAAESAQAADENAKASDDVKARTQVLYQAVSLF 618