Pairwise Alignments

Query, 366 a.a., GTP-binding and nucleic acid-binding protein YchF from Sphingobium sp. HT1-2

Subject, 363 a.a., GTP-dependent nucleic acid-binding protein EngD (RefSeq) from Shewanella amazonensis SB2B

 Score =  397 bits (1020), Expect = e-115
 Identities = 211/366 (57%), Positives = 258/366 (70%), Gaps = 3/366 (0%)

Query: 1   MGFRCGIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNEGRVAVPDDRLQTIARIGG 60
           MGF+CGIVGLPNVGKSTLFNALT+    +AAN+PFCTIEPN G V +PD RL  +A I  
Sbjct: 1   MGFKCGIVGLPNVGKSTLFNALTKA-GIEAANFPFCTIEPNTGVVPMPDPRLDELAAIVK 59

Query: 61  SAKIIETQLAFVDIAGLVRGASKGEGLGNQFLANIRETDAIVHVLRCFEDDDITHVEGKV 120
             ++I T + FVDIAGLV GASKGEGLGN+FLANIRET+AI HV+RCFE+++I HV  +V
Sbjct: 60  PERVIPTSMEFVDIAGLVAGASKGEGLGNKFLANIRETEAIGHVVRCFENENIVHVANRV 119

Query: 121 DPIADAETVETELMLADLESLEKRVPNLLKKGAQGDKEAKAAASVLGQTLELLRDGKPAR 180
           DP  D E + TEL LADL+S+E+ +    K+   GDKEAK    VL +   +L +GK  R
Sbjct: 120 DPAGDIEVINTELALADLDSVERAIVRQQKRAKGGDKEAKFEVDVLEKLRPVLDEGKMLR 179

Query: 181 LTQPRDEEEARLFAQAQLLTAKPVLYVCNVEEGAAAEGNAFSARVFEKAAAENASAVIVS 240
             +   EE A + A   LLT KP +Y+ NV E    E N     V   AA ENA  V V 
Sbjct: 180 SLELSKEELAAV-AYLNLLTLKPTMYIANVSEDGF-ENNPHLDAVRAIAAKENAVVVPVC 237

Query: 241 AAIEAELITMPVEERGEYLEALGLTEAGLARIIRAGYELLGLITFFTVGPKEARAWTVAK 300
           AAIE+EL  M +EER E++  LGLTE GL R+IRAGYELL L T+FT G KE RAWTV+ 
Sbjct: 238 AAIESELAEMDIEERDEFMADLGLTEPGLDRVIRAGYELLNLQTYFTAGVKEVRAWTVSV 297

Query: 301 GSKAPQAAGAIHSDFEKGFIRAETMAYADYVQFNGEAGAKEAGKWRSEGKDYVTQDGDIM 360
           G+ APQAAG IH+DFE+GFIRA+ ++Y D++ F GE GAKEAGK R EGK Y+ +DGD+M
Sbjct: 298 GASAPQAAGKIHTDFERGFIRAQVISYEDFINFKGEQGAKEAGKMRVEGKTYIVKDGDVM 357

Query: 361 LFRFNV 366
            F FNV
Sbjct: 358 HFLFNV 363