Pairwise Alignments

Query, 604 a.a., Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1) from Sphingobium sp. HT1-2

Subject, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  609 bits (1570), Expect = e-178
 Identities = 309/557 (55%), Positives = 393/557 (70%), Gaps = 7/557 (1%)

Query: 11  TYDTVVVGAGGSGLRATMGSAEAGLKTACITKLFPTRSHTVAAQGGIAASLGNNSPDHWT 70
           ++D VV+GAGG+G+RA +  +E GL  A ++K+FPTRSHTV+AQGGI  +LGN+  D W 
Sbjct: 7   SFDAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHKDDWQ 66

Query: 71  WHMYDTVKGSDWLGDQDAIEYMVREAPAAVIELEHAGVPFSRNQDGTIYQRPFGGHMQNM 130
           WHMYDTVKGSD++GDQ+AIEYM +  P +VIELE  G+PFSR ++GTIYQRPFGG  +  
Sbjct: 67  WHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFGGQSKEF 126

Query: 131 GAGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFYIEYFAIDLIM-EDGPNGKECRGVI 189
           G G    RT AAADRTGHA+LH LYQQ++K+    + E++A+DL+  +DG       G  
Sbjct: 127 G-GEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVKNQDGA----VLGCT 181

Query: 190 AICMEDGSIHRFRSHAVVLATGGYGRAYFSATSAHSCTGDGGGMVLRAGLPLQDLEFVQF 249
           AICME G I  F++ A VLATGG GR Y S T+AH  TGDG GM LRAG+P+QD+E  QF
Sbjct: 182 AICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQF 241

Query: 250 HPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSRSMAMEMREGR 309
           HPTGI GAGVL+TEG RGEGGYL N +GERFMERYAP+AKDLA RDVV+RSM +E+REGR
Sbjct: 242 HPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREGR 301

Query: 310 GV-GEHKDHIFLHLDHIDPKVLAERLPGITESGKIFAGVDLTRQPLPVTPTVHYNMGGIP 368
           G  G    HI L LDH+   VL  RLPGI E  + FA VD  ++P+PV PT HY MGG+P
Sbjct: 302 GCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGVP 361

Query: 369 CNYHGQVVTKVGDDPEVVVPGLFAVGEAACVSVHGANRLGSNSLIDLVVFGRATGLFLKD 428
               GQ + +     +V V GLFA GE A VSVHGANRLG NSL+DLVVFGRATGL L +
Sbjct: 362 TQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGE 421

Query: 429 NLKPNTPHKPLPANAADLALSRLDHYRNANGTTSTADIRMDMQRTMQKHAAVFRDSELLA 488
            L+     +P  A+  + +L+R   + N+ G      IR D+QR MQ + +VFR+ + +A
Sbjct: 422 TLRAQAEARPATASDIEASLARTMRWENSKGGEDPVVIRKDLQRCMQNNFSVFREGKAMA 481

Query: 489 DGVVKMQAVNKRLQDVKIADRSLIWNTDLIETLELDNLMSQAICTMEGAEARKESRGAHA 548
           +G+ +++ + +RL++  +AD+S  +NT  IE LELDNLM  A  T   A  R ESRGAHA
Sbjct: 482 EGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHA 541

Query: 549 HEDFPNRDDENWMKHTI 565
             D+P RDDENW+ H+I
Sbjct: 542 RFDYPERDDENWLCHSI 558