Pairwise Alignments

Query, 553 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

Subject, 534 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella sp. ANA-3

 Score =  289 bits (740), Expect = 2e-82
 Identities = 190/536 (35%), Positives = 295/536 (55%), Gaps = 35/536 (6%)

Query: 22  LTDLLDNALNLYPERVAIDFLGRTWTYAQVGQLVRRAARGLQDQ-GLRKGDRFGLCLPNC 80
           L DL++     + ++ A   LG+T ++  + +  R  A  LQ+   L+ GDR  + LPN 
Sbjct: 17  LIDLIERTSQRFGDKTAYACLGKTSSFNDIERDSRYFAAYLQNNTNLKPGDRIAIQLPNI 76

Query: 81  PYFAILYFAALRVGAIVVNFNPLYTERELEHQIRDSGTRMMAV-PDVRIIHEKVQAVAPR 139
             F I  + ALR G I+VN NPLYTEREL HQ  DSG + + V  D+     KV A  P 
Sbjct: 77  TQFVIAAYGALRAGLILVNTNPLYTERELIHQFNDSGAKALVVLSDLLPTLAKVVATTP- 135

Query: 140 AGLDKIVLCGMRDML-PWLQ---GLGFALFKRKDHARILDEGLHVRLKALLAHDAEPDAV 195
             ++ ++     D++ P +Q   GL     K  +  ++L +G  +     +     P A 
Sbjct: 136 --IELVISTHPLDLIDPQVQPKTGL-----KNVEFCQVLKQGAELPFSRFV-----PAA- 182

Query: 196 ERHPDDVAVLQYTGGTTGVPKGAMLTHANLTANSAQMVVHVGGLRPQQERT-LGVLPMFH 254
               +D+A LQYTGGTTG+ KGAMLTH N+ AN+AQ+   +G +  + E   +  LP++H
Sbjct: 183 ----NDLAALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIGSVITEGEDIFVAPLPIYH 238

Query: 255 VFALTTVLNFSVEIGAEIVLLPR-FEMKQVLRTMKRKPPTQFFGVPTIYVALNALPDDEI 313
           ++A    L    E G   VL+P   ++  +++T+ + P T F G+ T++VAL   P+ + 
Sbjct: 239 IYAFMVNLVLYFECGGCSVLIPNPRDISGLIKTLAKYPFTGFAGLNTLFVALCHQPEFKA 298

Query: 314 PDLSAVRACISGGAPLPLEVREEFEARTRARVVEGYGLSETAPIIACNPLFGTVKDNSCG 373
            D S ++  ISGG  L       ++  T   + EGYGLSET+P+I+ N   G  K  + G
Sbjct: 299 LDFSHLKITISGGTALTAAAANIWQQTTGNTISEGYGLSETSPVISLNAP-GYQKIGTIG 357

Query: 374 PSFPGTIIEIRDPENPSRVLPQGERGEVCARGPQVMKGYWQRPAETSAVFV-DGALRTGD 432
               GT +++ D EN + V  QGE GE+ ARGPQVM GYW  P ET+ V   DG  +TGD
Sbjct: 358 KPVLGTEVKLLD-ENGNEVA-QGEAGELAARGPQVMLGYWNNPQETANVMTADGFFKTGD 415

Query: 433 IGYFDEDGYLFLVDRIKDIIFCGGYNVYPRIIEDAAYQHPAVKEAIAIAIPDAYRGQSPK 492
           I   +E+G+  +VDR KD+I   G+NVYP  +E+    HP + E   + + D + G++ K
Sbjct: 416 IAILNEEGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPNIIECAVVGVKDEHSGEAVK 475

Query: 493 LFIALHEGSNLTVDELKV----FLQDRLSKIEMPKAFAFRDSLPKTLIGKLSKKDL 544
            F+ L + S    +++K     F +++L+  ++PK   F   LPK+ +GK+ +++L
Sbjct: 476 AFVVLKDDSQ-DHEQMKTAILNFCREQLTAYKLPKLIEFMPQLPKSTVGKILRREL 530