Pairwise Alignments

Query, 783 a.a., 3-hydroxyacyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.1.1.35) / Enoyl-CoA hydratase [fadN-fadA-fadE operon] (EC 4.2.1.17) from Sphingobium sp. HT1-2

Subject, 723 a.a., fatty acid oxidation complex subunit alpha FadB from Vibrio cholerae E7946 ATCC 55056

 Score =  118 bits (295), Expect = 1e-30
 Identities = 104/338 (30%), Positives = 149/338 (44%), Gaps = 32/338 (9%)

Query: 11  APPETIKKVCVIGAGVMGAGIAAQVANAGVPVLLLDIVPKEGGDRDAVAKGAVAKMLKTD 70
           A  +  +   V+GAG+MG GIA Q A  GVPVL+ DI P         A   + K L+  
Sbjct: 309 AASQDTQHAAVLGAGIMGGGIAYQSALKGVPVLMKDIAPHSLELGMTEAAKLLNKQLERG 368

Query: 71  PAPFMSKAAAKLVETGNIDDHLERVAECDWIVEAIVERLDIKQALYAKLEQLKRPGTAVS 130
                  A      T ++  H   + + D IVEA+VE   +K A+ +++E L    T ++
Sbjct: 369 KIDGFKMAGILASITPSL--HYAGIDQADVIVEAVVENPKVKAAVLSEVEGLVDTETILT 426

Query: 131 SNTSTIPLGHLVEGRDDQFKQDFLITHFFNPPRYMRLIEIVTGPDTDTAVARRVSDFVDR 190
           SNTSTIP+  L +    +  Q+F   HFFNP   M L+EI+ G  T      RV  +   
Sbjct: 427 SNTSTIPINLLAKSL--KRPQNFCGMHFFNPVHRMPLVEIIRGEHTSEDTINRVVAYA-A 483

Query: 191 KLGKRIVPARDTPGFIANRIGTYWLAVAINAAMDQGLTVEEADQIGGKPMGVPKTGIFGL 250
           K+GK  +   D PGF  NR+   + A   +  M  G    E D++  +  G P  G   L
Sbjct: 484 KMGKSPIVVNDCPGFFVNRVLFPYFA-GFSLLMRDGANFTEIDKVMERQFGWP-MGPAYL 541

Query: 251 VDLVGVDLMPLLTKSLSSTLPAGDAYFDTVRPMPLVDRMIAEGFTGRKGKGGFYAFDKAT 310
           +D+VG+D           T     A             ++AEGF  R  K G  A D   
Sbjct: 542 LDVVGID-----------TAHHAQA-------------VMAEGFPTRMAKSGREAIDALY 577

Query: 311 KTKK-ALDLATGEYRVSVKPASLPGRAEKDLAALVAAP 347
           + KK      +G Y+ +V     P +A  D    + AP
Sbjct: 578 EAKKFGQKNGSGFYQYTVDKKGKPKKAFSDDVLAILAP 615



 Score = 57.8 bits (138), Expect = 2e-12
 Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 9/141 (6%)

Query: 478 VGDGVACLEFTG--KMNALDGDVMKLIGQAIPVV--QDKFKALVVYNEGSNFSAGANLG- 532
           + +G+A L F     +N LD   ++ + +A+  +      K L++ ++   F  GA++  
Sbjct: 13  LANGIAELSFCAPASVNKLDLHTLESLDKALDALAADSSVKGLLLSSDKEAFIVGADITE 72

Query: 533 -LALFALNIAAWGEIEKLVAGGQQAYKALKYALFPVVSAPAGMALGGGCEILLNSDAVQA 591
            L LFA   A   E+++ +    + +  L+   FP +SA  G  LGGGCE +L +D    
Sbjct: 73  FLGLFAKPEA---ELDEWLQFANRIFNKLEDLPFPTLSALKGHTLGGGCECVLATDFRIG 129

Query: 592 HAESYVGLVECGVGLIPGWGG 612
            A + +GL E  +G++PG+GG
Sbjct: 130 DATTSIGLPETKLGIMPGFGG 150



 Score = 26.6 bits (57), Expect = 0.005
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 367 SLVGEAADNIVGIDDAMKLGYNWKFGPFELIDRLG--PGKLAERLAAEG 413
           SL+     N   ID  M+  + W  GP  L+D +G      A+ + AEG
Sbjct: 512 SLLMRDGANFTEIDKVMERQFGWPMGPAYLLDVVGIDTAHHAQAVMAEG 560