Pairwise Alignments

Query, 387 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 86/345 (24%), Positives = 153/345 (44%), Gaps = 22/345 (6%)

Query: 25  LVTWLPLLLLAIVAVQLSAGVMRNLPIVVVDEDGGGVARDLTRKLEASPGLKVAARPPDM 84
           +V  +PL+ L +    ++  V RN+PI VVD+     +R L   ++ +  ++V      +
Sbjct: 27  MVVMIPLIQLLLFGFAINTDV-RNIPIGVVDQSDSSFSRLLVESVKVTQVIRVKQHYLTV 85

Query: 85  AQAEHLVRSNAAYAVVLIPRDL-ERTVLRGETGKILLFYNASYSTPSGSVLREVGTVVQA 143
            +AE  + S    A +++P DL  R+  + E G+ L+          GS      T++  
Sbjct: 86  NEAEKAIASGDIRAALILPSDLVARSQQQRELGQWLI---------DGS-----DTMI-- 129

Query: 144 HAKALAGEQSAAIAGPARVRPQPVS--VQSRILYNPQTSYELQLVALIHPALLHLLFMIA 201
            A AL G ++  +     +  QP++   +  +LYNP     + +V  +   +L +  ++ 
Sbjct: 130 -AGALLGLKNMPLTDLPTLGIQPLTPTFEITLLYNPSRRSAVNIVPGLLGVILTMTMILF 188

Query: 202 VVSALGRELRDGTIGAWLAGPRGEAVAAVAGKIAPYILIFLLWGALATGYLAVYRGWPVQ 261
             +A+ RE   G +   +  P   ++  + GKI PYI + L+  A+  G        P+ 
Sbjct: 189 TSAAIVRERERGNLELLITTPV-HSIELMIGKIVPYIFVGLIQVAIILGLGHFIFAVPIN 247

Query: 262 GSVAMLMGGYLALYLAYAGMALFIVGATLSMGQALSMTALYAGASFAFAGAIFPIESASA 321
           G+++ ++ G L    A   + L I     +  QA+ MT      S   +G +FP E    
Sbjct: 248 GALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTVFILLPSILLSGFMFPYEGMPT 307

Query: 322 FARLWSALLPFTRFARLVAEQWMIGAPVLASLGSILALFAFLVVG 366
            A+  S LLP T F RL+    + GA +       L L  F + G
Sbjct: 308 AAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLFG 352