Pairwise Alignments

Query, 387 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 382 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 45.8 bits (107), Expect = 2e-09
 Identities = 75/327 (22%), Positives = 131/327 (40%), Gaps = 33/327 (10%)

Query: 45  VMRNLPIVVVDEDGGGVARDLTRKLEASPGLKVAARPPDMAQAEHLVRSNAAYAVVLIPR 104
           + R   + VV+ D    +  L R ++A+P +K+  R   +A A+          +++IP 
Sbjct: 43  IPREQTVSVVNLDQSQASFQLERMVDATPQVKIVQRDHTIADAKQAFLDKKVAGILVIPE 102

Query: 105 DLERTVLRGETGKILLFYNASYSTPSGSV---LREVGTVVQAHAK----ALAGEQSAAIA 157
              + +L G++  +    +ASY    G++   L + G  + A  K     + GE  A   
Sbjct: 103 HFYKDLLLGKSPTLAYAGDASYFLVYGTIVEGLAQAGGTLAAQTKVSRLVIEGEPMAF-- 160

Query: 158 GPARVRPQPVSVQSRILYNPQTSYELQLVALIHPALLHLLFMIAVVSALGRELRDGT--- 214
             A     P S   +  +NP+  Y    V  + PA+  L+    ++ A G  L  GT   
Sbjct: 161 --AAQHFSPTSANLKPTFNPRMGY----VDYVVPAVFVLILQQTLIMAAG--LMVGTQKQ 212

Query: 215 -IGAW-LAGPRGEAVAAVAGKIAPYILIFLLWGALATGYLAVYRGWPVQGSVAMLMGGYL 272
             G W    P    +      +A Y L+ L +   +     V         +++L+   L
Sbjct: 213 GHGYWSRVAPAKLLLVRSFVLVAVYYLLSLYYFGASFDLHGVNTLAKPNDLISLLLPFLL 272

Query: 273 ALYLAYAGMALFIVGATLSMGQALSMTALYAGASFAF-AGAIFPIESASAFARLWSALLP 331
           A    + G+AL   GA     + +++  L +     F AG I+P+E   A   +W A   
Sbjct: 273 A--CNFVGIAL---GAVTPRRELVTLVVLISSMPLIFTAGFIWPLEMIPA-PLVWLAQC- 325

Query: 332 FTRFARLVAEQWMIGAPVLASLGSILA 358
              F    A Q  +G   +A+  S +A
Sbjct: 326 ---FPSTPAIQGFLGLNQMAASWSTIA 349