Pairwise Alignments

Query, 387 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 373 a.a., ABC transporter, permease protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 64.3 bits (155), Expect = 5e-15
 Identities = 68/317 (21%), Positives = 137/317 (43%), Gaps = 12/317 (3%)

Query: 25  LVTWLPLLLLAIVAVQLSAGVMRNLPIVVVDEDGGGVARDLTRKLEASPGLKVAARPPDM 84
           ++  +PL+ L +    ++    R+LP  +V+      +R L + +EA+  +         
Sbjct: 25  MIVMIPLVQLMLFGYAINTDA-RHLPAGLVNLSDSSYSRALVKAVEATQVVDFKRSYSSA 83

Query: 85  AQAEHLVRSNAAYAVVLIPRDLERTVLRGETGKILLFYNASYSTPSGSVLREVG-TVVQA 143
           AQAE  +      AV+ +  DL+  ++R           A ++ P G  L +   TVV +
Sbjct: 84  AQAEAAITRGEVKAVLYLGADLDERLVRHPA----FAGQAYFAEPVGQWLVDGSDTVVAS 139

Query: 144 HAKALAGEQSAAIAGPARVRPQPVSVQSRILYNPQTSYELQLVALIHPALLHLLFMIAVV 203
             ++L       I G   ++  P S +    +NP+    + +V  +   +L +  ++   
Sbjct: 140 TIRSLRQMPLDEITGRT-LKSNPPSFEVVQYFNPEQRSVVNIVPGLLGVILTMTMVMFTS 198

Query: 204 SALGRELRDGTIGAWLAGPRGEAVAAVAGKIAPYILIFLLWGALATGYLAVYRGWPVQGS 263
           +A+ RE   G +   +  P    +  + GKI PY+L+  +   +      +    P++G 
Sbjct: 199 AAIVREREQGNMEFLITTPV-RPLELMLGKITPYVLVGFVQVTIILSAGHLLFDVPIRGG 257

Query: 264 VAMLMGGYLALYLAYAGMALFIVGATLSMGQ--ALSMTALYAGASFAFAGAIFPIESASA 321
           +  +   + A+    A + L +V +T++  Q  ++ MT      S   +G +FP E+   
Sbjct: 258 IDSI--AFAAMLFICASLTLGLVISTIAKTQLQSMQMTVFILLPSILLSGFMFPYEAMPV 315

Query: 322 FARLWSALLPFTRFARL 338
            A+  +  LP T F R+
Sbjct: 316 AAQWIAEALPATHFMRM 332