Pairwise Alignments

Query, 345 a.a., HlyD family secretion protein from Sphingobium sp. HT1-2

Subject, 354 a.a., multidrug resistance efflux pump (RefSeq) from Shewanella amazonensis SB2B

 Score = 97.4 bits (241), Expect = 5e-25
 Identities = 77/253 (30%), Positives = 125/253 (49%), Gaps = 23/253 (9%)

Query: 32  FLVVVILGLGLWLAY--RPVPDQLQGMVEARELRITSKVSARITAFHVEEGQPVKTGQLL 89
           +L V +LG+ L+  +  R  P   Q  V A  +RIT +V+  I   +V+  + V+ G+LL
Sbjct: 14  YLFVTVLGIWLYSLWADRVTPMTTQAFVHAYLVRITPEVAGNIVQVNVDNDKRVEAGELL 73

Query: 90  YTLDSPEVEARSEQAGGALAAAQANADKADE--GARPEDIRAAEAQWRRAQAAADLAQTT 147
           + +D+ + +   E+       AQA+ ++  +  GA    ++ A+A+   A+AA D A+  
Sbjct: 74  FEIDATQYQIAREK-------AQADLERVGQSLGASTAAVQVAQAKVGDARAALDNAKAQ 126

Query: 148 YQRTERLFEQGVLAGQKRDESR---ANALASNEAARAA--RAQYDLALAGARRQDRQAAS 202
             R E L E+GVL+  + D +R     A AS EAA+A+  +A+ +L   G    + +A  
Sbjct: 127 ATRVETLAERGVLSQAELDNAREAAQRAQASLEAAQASLLQAKQNLGPVGENNPELKA-- 184

Query: 203 GQVRQARGALAEVEAAEKETRVFAPSDGEIGRRLAQSGELVPQGFPVFVLTDIDHPWVTL 262
                A  ALA+ E   K TRV APS G +       G+ +  G P     D    W++ 
Sbjct: 185 -----AMAALAKAELDLKRTRVVAPSRGVVTNVQLSPGQYMAPGQPALTFIDPREVWISA 239

Query: 263 TLREDQFSAIRRG 275
            +RE+    IR G
Sbjct: 240 MMRENSLEHIREG 252