Pairwise Alignments

Query, 345 a.a., HlyD family secretion protein from Sphingobium sp. HT1-2

Subject, 323 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella loihica PV-4

 Score =  253 bits (646), Expect = 5e-72
 Identities = 137/320 (42%), Positives = 193/320 (60%), Gaps = 2/320 (0%)

Query: 22  RKRKLLPLIAFLVVV-ILGLGLWLAYRPVPDQLQGMVEARELRITSKVSARITAFHVEEG 80
           R  ++L ++A + +V IL  GL LA+ P  ++LQG +EARE  I+SKV  R+    V  G
Sbjct: 2   RTNRILAIVALIALVAILAYGLMLAHTPKAERLQGQIEAREYNISSKVPGRVAQVMVRRG 61

Query: 81  QPVKTGQLLYTLDSPEVEARSEQAGGALAAAQANADKADEGARPEDIRAAEAQWRRAQAA 140
             V  G LL+ +DSPE+ A+  QA G   AA+A   +AD GAR + + A++ QW +A+AA
Sbjct: 62  DQVAEGDLLFAIDSPELNAKLMQAQGGRDAAKALQQEADNGARKQQVAASKEQWLKAKAA 121

Query: 141 ADLAQTTYQRTERLFEQGVLAGQKRDESRANALASNEAARAARAQYDLALAGARRQDRQA 200
           A LA+TTY+R E LF +GVLA QKRDE+     A+    +AA A Y +A  GAR + + A
Sbjct: 122 ATLAETTYKRVEALFSEGVLARQKRDEAFTQWQAAKYTQQAAYAMYQMAEEGAREETKAA 181

Query: 201 ASGQVRQARGALAEVEAAEKETRVFAPSDGEIGRRLAQSGELVPQGFPVFVLTDIDHPWV 260
           A G  R A GA+ EV A   ++++ +P  GE+   L   GEL P GFPV  + D+   W 
Sbjct: 182 AEGNARMAEGAVKEVSAILADSQMRSPKSGEVSEVLLHPGELAPSGFPVVSVIDMQDAWA 241

Query: 261 TLTLREDQFSAIRRGRVLTGRIPALGDRCAQFRVFYIAPAGDFATWRATRQSSGFDVKSF 320
              +REDQ    + G  L   IPALG+R   F+V +I+  G FATWR+T     FD+++F
Sbjct: 242 VFQVREDQLKGFKVGDTLEVEIPALGER-YPFKVAHISVMGHFATWRSTESGHDFDMRTF 300

Query: 321 DVRLSPVSRVDGLRPGMTVL 340
           ++ L PV+ +  LR GMT L
Sbjct: 301 EMELRPVTPIADLRVGMTSL 320