Pairwise Alignments

Query, 456 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  184 bits (466), Expect = 7e-51
 Identities = 132/463 (28%), Positives = 224/463 (48%), Gaps = 26/463 (5%)

Query: 7   MLVAALATAVCQGAQAQTIDRLDLDYRSAQARLLERSDAIQGADADVRSKEAQKGSTSTL 66
           M V +L+ A+C            L ++ A   L ++++++    A+V      K +T  L
Sbjct: 1   MKVKSLSLAICSILFMPIAHAAPLSFQEAWDLLQQQNNSLAAQRANVERYAHLKDATQNL 60

Query: 67  RRPTVEFEGQMIRYQKTLYLPLGPLADVAQDYSISDPLRFEIERTSTRPIVT-------- 118
             P+V       R  + + L    + D A      DP        S  P+VT        
Sbjct: 61  NLPSVSVGANFTRLDQDVTLSGKQIVDSAGGI---DPNLIASLSPSLLPLVTHLGAAKST 117

Query: 119 ------------ATLPLYSGGQIPAAQAGAAAQLGQSRAERQIVIDNGLLQMTQLYFGQQ 166
                       A  P+++GG+I AAQ  AA +  +++++  + I      + + YF   
Sbjct: 118 ITERDIFTSSIRAIWPIFTGGRITAAQDAAAGKEEEAQSQLAMEIQARYEDLAKYYFSVV 177

Query: 167 LLERVRDVRRDALAGLERHVADALKLEQEGFISRAQRLQAQVARDDAARELEKAQADLAS 226
           L + V   R     GL +H  +ALKLEQ+G I+  +RLQA  + D A  E +KAQ  L  
Sbjct: 178 LAKEVLATRIAVEEGLTQHRDNALKLEQQGQIAHVERLQADASLDKAKVERKKAQKTLDI 237

Query: 227 AQVALAGALRAPSGVDPVSPIFVIRQPLRSLDTYVDAALRAHPQLDRLGALEDQAEAGVA 286
           AQ AL   L A   V+P   +F I   L  +  +++  L  +P L  L A E QA + + 
Sbjct: 238 AQSALTQILGATETVEPSGMLF-INTSLPPMHAFIEQTLNTYPGLSLLDAKEKQASSLIK 296

Query: 287 LQRAKLRPTIYGFAQYNFDRRDTLLTD--PDWSVGVGLRYTLFSGVGRSQAVQAARETVT 344
            ++ K  P +Y +  Y+    D+L +   PDW VGVG+   L    GRS+ V+AA   V 
Sbjct: 297 AEQGKYYPEVYLYGDYSLHEDDSLASQMKPDWLVGVGVNIPLIENSGRSEQVKAANSAVN 356

Query: 345 QANAGLREARTQIEIGVTRSWNDAEAARRRFELTDTAITAAQENLRVQTLGYQEQQTTSL 404
           Q      +A+  + + V +++ +AE A       ++++  AQENLR++   + +  +TS+
Sbjct: 357 QVRYLKAQAKQDLSVLVEKTYLEAEQALEEVTGLNSSLNLAQENLRLRQKAFSQGLSTSV 416

Query: 405 DVIDAQLGLARSRIQRAQAGYDFVVALAQLLHVSGQIATLPDY 447
           DV+DA+L LA  R Q++ A ++++++L +LL +S ++++   Y
Sbjct: 417 DVVDAELYLASIRTQQSLASFNYLISLNKLLALSSEMSSFSTY 459