Pairwise Alignments

Query, 309 a.a., Transcriptional regulator, LysR family from Sphingobium sp. HT1-2

Subject, 312 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  167 bits (423), Expect = 3e-46
 Identities = 106/292 (36%), Positives = 155/292 (53%), Gaps = 4/292 (1%)

Query: 8   ERLTGLIAFARVGSLGSFTAAARSLSISPSAVSKSVQRLEQTLGVPLITRTTRSLALTPE 67
           E L  +  F  V   GSF+AAAR L IS S VS  V  LE  LGV LI RTTRSL+LT  
Sbjct: 3   ELLEPIAIFTHVARAGSFSAAARRLGISKSKVSTQVADLEHRLGVQLIQRTTRSLSLTEA 62

Query: 68  GRDLHERALLLLRDAEEIEQMAITARSEPAGTLRIAASLPIGIHVLAPKLPAFRERHPQV 127
           G  L+ +   LLRDAE+             G L++  S   G   + P LP+F  +HP++
Sbjct: 63  GHLLYLQGEELLRDAEQAIASVHNLNDATRGVLKVGISQSFGAMHIIPALPSFMAKHPEL 122

Query: 128 MVELRLNDQFVDLVEAGIDIAVRIGDLADTRLLARRLAPHRFCCFASPSYLASRGRPSHP 187
            +++ L D  VD+V  G+D+ + + +     ++AR L   +F   ASP Y+A  G PS P
Sbjct: 123 ELQVSLLDHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLVASPDYIAKHGEPSRP 182

Query: 188 DELVGHDTVNLRYQSS-GQVLRWPFRVGDREVEIVPSSGIVMDASEALMAALAAGGGVGI 246
           ++LV H+   L YQ    +   W F+ GD   EI  S    +D + AL +A  +G GV  
Sbjct: 183 EQLVDHNC--LVYQGEWHEHSMWQFKKGDDYCEIGVSGNFRVDNAPALKSAAISGLGVVY 240

Query: 247 SADFVAAPYVARGELVPVLSEFAVERH-NITAVWPESRRTNPAVRAFLAHLQ 297
            A ++    +A+G LVP+L ++ +  H  + AV+P  +   P V AF+  ++
Sbjct: 241 LASYLMEDEIAKGTLVPLLKDWQLTHHLPLQAVYPRRKHLAPKVSAFIEFIK 292