Pairwise Alignments

Query, 403 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 400 a.a., ISSod4, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  153 bits (386), Expect = 1e-41
 Identities = 93/368 (25%), Positives = 185/368 (50%), Gaps = 24/368 (6%)

Query: 15  TGDGDFLRTIAESVLQIIMEADVDGLVGAGRHERSGERTTWRNGYRDRSLDTRLGTLNLK 74
           TG    L  + + + +  ++A+++      +H     +   +NG   +++    G   L 
Sbjct: 21  TGKDSILGPLIKQLTEAALQAELE------QHLAHDPQPNRKNGKTPKTIKHPSGNFELD 74

Query: 75  IPKLRTGAYFPGFLEPRKT-----VEKALVAVIQEAWIAGVSTRRVDELVQAMGMTGISK 129
            P+ R G + P  ++  +T     +E+ ++++       G+S R +++ V+ M    +S 
Sbjct: 75  APRDRNGTFEPQLIKKNQTTLTDEIERKVLSMFS----IGMSYRDINQHVEDMYGLNVSN 130

Query: 130 SSVSKLCKDIDERVHAFLKRPLAGDWPYLWLDATYLKVREGGRIVSVAAIIAVAVNTEGR 189
           ++VS +   +   + A+ +RPL   +P +WLDA + KV+E GR VS A    +A+N +G+
Sbjct: 131 ATVSAITDKLIPELKAWQQRPLDSHYPIVWLDAIHYKVKEDGRYVSKAVYTLLALNMKGK 190

Query: 190 REIVGLHIGPSEAEPFWSTFLKDLTRRGLTGVKLVISDAHEGLKAAITRVLSAT-WQRCR 248
           +EI+GLH+  +E   +W + L DL  RG+  + +   D   G   AI  +   T  Q C 
Sbjct: 191 KEILGLHLSENEGANYWLSVLTDLNNRGVKDILIACVDGLTGFPEAIASIFPHTETQLCV 250

Query: 249 VHFMRNALAYVPKGQNTVVAAAIRQVFLQPDHAAATQVWRQVADQLRARW----PKLGAC 304
           +H +RN++ YV         A ++ V+     A + +      D+L A+W    P +   
Sbjct: 251 IHQIRNSMKYVASKNQKAFMADLKPVY----RAVSKEAAEMALDELEAKWGDAYPLVINS 306

Query: 305 MDDAEHDVLAYMTFPEQHRVKLHSTNPLERLNKEVKRRADVVGIFPNEDSIIRLVGAVLL 364
                H++  Y  +PE  R  +++TN +E ++++ ++     G FPNE+S+++L+ A +L
Sbjct: 307 WRRKWHNLSHYFKYPEHIRKVIYTTNAVEAVHRQFRKLTKTKGAFPNENSLLKLLYAGIL 366

Query: 365 EQNDEYQL 372
             +D++ +
Sbjct: 367 NASDKWTM 374