Pairwise Alignments

Query, 398 a.a., Plasmid replication protein RepA from Sphingobium sp. HT1-2

Subject, 418 a.a., replication protein from Sinorhizobium meliloti 1021

 Score =  184 bits (468), Expect = 3e-51
 Identities = 127/383 (33%), Positives = 198/383 (51%), Gaps = 25/383 (6%)

Query: 21  LRRAAIDPSDRKTL-SITMGASVAAEFLGRTPEALAKAEARGRLPAPKTANNGRRFYTVE 79
           +R     P+  KTL S T G   AA+ +G +   L +    G  P P T   GRR Y++ 
Sbjct: 38  MRDRLFAPTAMKTLRSFTSGE--AAKLIGVSDGYLRQLSLAGEGPQPDTGAGGRRSYSLS 95

Query: 80  DLIAIREAL---------GIKA-GKLP------DERAVVVAVQNFKGGVSKSTTSKHLAD 123
           D+ A+R  L         G KA G L        E   V++V NFKGG  K+T+S HLA 
Sbjct: 96  DINALRRHLAEQAIAKGNGAKARGYLKWRDAARSEHLQVISVTNFKGGSGKTTSSVHLAQ 155

Query: 124 YLALRGYRVLVVDCDPQASMSVMFDVNLEELVEETHTLSNYLSPRID-EADSFRKTIKPT 182
           YLAL G+RVL VD DPQAS+S +F    E  +    TL  Y + R D EA   +  I+ T
Sbjct: 156 YLALTGHRVLAVDLDPQASLSALFGYQPELDLTGNDTL--YGAIRYDAEARPLKDIIRKT 213

Query: 183 AWPNIDICPANLGLQDTEWELTATI---EEGPHAIAGAFRMLRVGLEEVRHDYDVIILDP 239
            +  +D+ P NL LQ+ E      +   + G  A    F  ++  L  V  DYDV+++D 
Sbjct: 214 YFDGLDLVPGNLELQEFEHTTPQALSARQSGADAGPLFFARVQAALASVADDYDVVVIDC 273

Query: 240 PPAMGFLGVNTLSAADGLLIPVPARQLDYLSTIHFMQTCREAMSLVSKFDNSIDYGFIRV 299
           PP +G+L ++ L A+  +++ V  + LD  S   F+    + +S+V      +++ F+R 
Sbjct: 274 PPQLGYLTLSALCASTSVIVTVHPQMLDVASMNQFLYMTSDLLSVVRDAGGELNFDFLRY 333

Query: 300 VCTMFQPNRTNEAQMLQVMEKTYAGQMLSTPILLSEEIKNAGIAMSSIYEINKPYGSHQT 359
           + T F+PN   +AQ++  M   +  ++L++ ++ S  I +AG+   ++YE+ +   +  T
Sbjct: 334 LVTRFEPNDGPQAQIVGFMRSLFGDRVLTSAMVKSTAISDAGLTKQTLYEVGRENFTRAT 393

Query: 360 YTRCRDNLNAVFKELEKDICKQW 382
           Y R  ++LNAV  E+E  I   W
Sbjct: 394 YDRAIESLNAVNGEIEALIHAAW 416