Pairwise Alignments

Query, 398 a.a., Plasmid replication protein RepA from Sphingobium sp. HT1-2

Subject, 398 a.a., replication protein A from Sinorhizobium meliloti 1021

 Score =  202 bits (514), Expect = 1e-56
 Identities = 132/373 (35%), Positives = 196/373 (52%), Gaps = 23/373 (6%)

Query: 22  RRAAIDPSDRKTLSITMGASVAAEFLGRTPEALAKAEARGRLPAPKTANNGRRFYTVEDL 81
           ++    PS +KT+ +   A  AA F+G     L +  + G  P P   +NGRR Y +ED+
Sbjct: 34  QKKIFSPSAQKTMRLFSPAEAAA-FIGIGEGYLRQIASEGHGPQP--LSNGRRMYAMEDI 90

Query: 82  IAIREAL--GIKAGKL-----PDERAVVVAVQNFKGGVSKSTTSKHLADYLALRGYRVLV 134
             IR  L  G K GK      P E+  VV+V NFKGG  K+TTS HLA YLALRGYRVL 
Sbjct: 91  DRIRRVLDEGSKTGKYIPHRRPGEKLQVVSVMNFKGGSGKTTTSAHLAQYLALRGYRVLA 150

Query: 135 VDCDPQASMSVMFDVNLEELVEETHTLSNYLSPRIDEADSFRKTIKPTAWPNIDICPANL 194
           +D DPQAS+S +F    E  V E  TL  Y + R +      + ++ T   N+ + P NL
Sbjct: 151 IDLDPQASLSALFGHQPELDVGEGETL--YGAIRYEAPRPIAEVVRSTYTANLHLIPGNL 208

Query: 195 GLQDTEWELTATIEEGPHAIAGAFRML---RVG--LEEVRHDYDVIILDPPPAMGFLGVN 249
            L + E E    +      IAG+   +   R+G  L E+   YD++++D PP +GFL ++
Sbjct: 209 ELMEFEHETPKAM------IAGSTETMFFARIGEVLSEIESFYDIVVIDCPPQLGFLTMS 262

Query: 250 TLSAADGLLIPVPARQLDYLSTIHFMQTCREAMSLVSKFDNSIDYGFIRVVCTMFQPNRT 309
            L AA  +LI V  + LD +S   F+    E M++V        Y ++R + T F+PN  
Sbjct: 263 ALCAATSVLITVHPQMLDVMSMSQFLSMTSELMAVVENAGGRTSYDWMRYLVTRFEPNDG 322

Query: 310 NEAQMLQVMEKTYAGQMLSTPILLSEEIKNAGIAMSSIYEINKPYGSHQTYTRCRDNLNA 369
            ++QM   M   +  +ML   ++ S  I +AG+   ++YE+ +      TY R  D+L+ 
Sbjct: 323 PQSQMTGFMRAIFGNRMLQNAMVKSTAISDAGVTKQTLYEVERSQFIRGTYDRAMDSLSL 382

Query: 370 VFKELEKDICKQW 382
           V  E+E+ I + W
Sbjct: 383 VNAEIEEMIRRVW 395