Pairwise Alignments

Query, 600 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Sphingobium sp. HT1-2

Subject, 596 a.a., acyl-CoA dehydrogenase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  582 bits (1500), Expect = e-170
 Identities = 305/598 (51%), Positives = 400/598 (66%), Gaps = 3/598 (0%)

Query: 1   MPSYNAPVRDTRFVLDHVVGLERYANLPGFENATPDLVEAILTEGGKIASEVLFPINAVG 60
           MP Y AP+RD +F+LD ++ + +   L GF+   PDLV+AIL      ++EV+ P+N+VG
Sbjct: 1   MPVYQAPLRDYQFILDEMLHIYQQDALKGFDEIDPDLVDAILQGMADFSTEVMLPLNSVG 60

Query: 61  DKEGCTRHADGSVTTPTGFKAAYDQFVEGGWTTLHAPTEFGGQGLPNVVATAVTEYVLSA 120
           D +GC +  DG V TP GF  AY QFV+ GW TL     +GGQGLP VV    TE   S 
Sbjct: 61  DVQGC-KLVDGKVVTPEGFADAYQQFVDNGWPTLTCDPAYGGQGLPEVVGIFATEMQTST 119

Query: 121 NQAFEMYHGLTAGAIAALIAKGSDEQKATYLPNMVSGVWTGTMNLTEPHSGTDLGLIKTK 180
           N AF MY GLT GA +A+ A GS+  K  YL  +VSG WTGTMNLTE H+GTDL L++TK
Sbjct: 120 NMAFAMYPGLTHGAYSAIHAHGSEALKQKYLAKLVSGEWTGTMNLTESHAGTDLALLRTK 179

Query: 181 AVPNGDGSFAISGTKIFISAGEHDLAENIIHLVLAKTPGAPDSSKGISLFVVPKFIVNED 240
           AVP  DG FAI+G KIFIS+G+H   +NI+HLVLA+ P AP+  KGISLF VPK +VN D
Sbjct: 180 AVPTADGYFAITGEKIFISSGDHQFTDNIVHLVLARLPDAPEGVKGISLFAVPKVLVNSD 239

Query: 241 GSLGDRNAVSCGSLEHKMGIHGNATCVMNYDGAKGWLVGEENKGLAAMFIMMNAARLGVG 300
           GSLG+ N++    LEHKMGIHGN+TCVM ++GA G LVGE ++GL AMF MMN ARLGVG
Sbjct: 240 GSLGEANSLYASGLEHKMGIHGNSTCVMVFEGALGELVGEPHQGLRAMFTMMNQARLGVG 299

Query: 301 LQGLGQGEIAFQNAVHYAKDRRQGRALTGPKEPEEKADTLFVHPDVRRMLMEGKALTEGL 360
           +QGLG  EIA+Q+A+ YAKDR Q RA++G K PE+ AD + VH DVRRML+  KA  EG 
Sbjct: 300 MQGLGVSEIAYQSALAYAKDRLQSRAISGAKAPEKAADPILVHGDVRRMLLSQKAFNEGA 359

Query: 361 RALILWGALQHDLSHSAATEEERQAADDLLQLLTPVIKGYGTDKGFDVAVSSQQVFGGHG 420
           RAL+   AL  D +   +   + + A  L  L TPV+KG+ T++GF+  V +QQVFGGHG
Sbjct: 360 RALVGQQALWLDEAERHSDPAKAKVAAQLAALFTPVVKGFITNRGFNACVDAQQVFGGHG 419

Query: 421 YIWENGVEQYVRDARIAQIYEGTNGVQAMDLVGRKLPMNGGRALQAFLKILATEIAEAKG 480
           YI E G+EQ+VRD+RIA IYEGTNG+QA+DLVGRKL  + G A+Q +   L TE  +++G
Sbjct: 420 YIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQW-SALVTEFIQSQG 478

Query: 481 NE-KLASFADALEKAKGQLEAATMWLMQNAMKNPDNAGAGAHHYMHILGIVATGLMWLRM 539
            + ++  +   L      L+ A+ +L  +A  NPD  GA +  Y+ + GI A   MW RM
Sbjct: 479 KDPQMQPYISGLMDCATDLQKASGYLATHAASNPDIIGAASMAYLELFGITALAWMWARM 538

Query: 540 AKAATGLLDAGEGDAGFLEAKLVTARFFAERIMPDAGSLRRKIEGGADTLMALDPDMF 597
           AK A   L+ G  ++ F +AKL TA F+       + SLR+++E  ++ L  LD  +F
Sbjct: 539 AKIALTALENGTQESNFYQAKLKTADFYMAYWAVQSRSLRKQLEQASEMLTTLDEAIF 596