Pairwise Alignments

Query, 542 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  147 bits (371), Expect = 1e-39
 Identities = 141/541 (26%), Positives = 232/541 (42%), Gaps = 45/541 (8%)

Query: 35  SDTAADALAHAARDTPDRILLIDGDHCL--TAAGLHDQAQRLAQALL-VRFPVGSVISFM 91
           +DT  +     A+  PDR  L+  D  L  T     ++   LA+ LL +    G  I   
Sbjct: 5   NDTIGEFFEKQAQKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIW 64

Query: 92  LPNWQEAAVIYMGATLAGMVANPILPSLRDHDLRFILADVDSRMIFVPERFRGHDYGAML 151
             N  +           G+V   +  + + H+L +++   D + + + + FR  +Y  +L
Sbjct: 65  ARNVPDWLTFMFATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEIL 124

Query: 152 ERVAAEM----------ERPPEI--AIVRGEDGKVCAYDA----LLTSAPAGRPL----P 191
             +  E+          E  P +   I  G++     Y+     LL +  +   L     
Sbjct: 125 YELVPELKTSQRGKLNSEEFPYLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKK 184

Query: 192 ALDADEVRMVMYTSGTTGRPKGVMHSHNSINALIRQIGRHWLVEPGDRFLVPSPISHIGG 251
            LD+D+V  + YTSGTTG PKGVM +H +I      IG        +R  +P P+ H  G
Sbjct: 185 GLDSDDVINMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTEEERLCLPVPLFHCFG 244

Query: 252 SIYAFETPLLLGATAILMEQWNPDDAVRIMAEADCTHMAGATPFLQHLLAAARAADTRLP 311
            +      L  G T +++E ++P   +  + +  CT + G         +        L 
Sbjct: 245 IVLGVLALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEMFDLS 304

Query: 312 ALKLFICGGASVPPALIREAAGYFEQAVVSRVYGSTEL-PVTTVGVIDRADVTHAAETDG 370
           +L+  I  G++ P   +++         ++  YG TE  PV T+  +D        E+ G
Sbjct: 305 SLRTGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVDDP-FEKRVESVG 363

Query: 371 R--PGIATVRIAPD----------GEIRARGPQMMVGYIHKADEDAS-FDPDGYYRSGDQ 417
           +  P      I P+          GEI  RG  +M GY    ++ A   + DG+  SGD 
Sbjct: 364 KAMPHCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSGDL 423

Query: 418 GAWVDGDHLVVTGRIKDLIIRNGENIAPKEIEDLLVGHDAIAEIAIVGVPDPRTGERAVA 477
               +  +  + GRIKD+IIR GENI P+EIE+ L     I +  +VG+PD + GE   A
Sbjct: 424 AVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIVGA 483

Query: 478 VIVPRPG---ATPDVAALAAHLAGHGVARFKYPEAVALWDALPKNDAGKVLKQQIRARLV 534
            ++P+ G      DV   A       +AR+K P+ V + +  P   +GK+ K ++    V
Sbjct: 484 FVIPKEGYEIKEEDVRDFAL----EKIARYKVPKHVFVVEEFPMTASGKIQKFKLTELAV 539

Query: 535 E 535
           E
Sbjct: 540 E 540