Pairwise Alignments

Query, 242 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

 Score =  166 bits (420), Expect = 4e-46
 Identities = 88/227 (38%), Positives = 133/227 (58%), Gaps = 7/227 (3%)

Query: 12  VIVVDDDADIRGLIVDQLRQENYDLLSASNLAELRQALRDQPVDLIVLDLNLPDGDGLSL 71
           +++V+D+   R  +      E Y +  ASN  E+ Q L D P++L+++D+NLP  +GL L
Sbjct: 6   ILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGKNGLLL 65

Query: 72  CRELRAEGSGIQIIMVTARGSAIDRVLGLELGADDYLTKPFEPRELLVRIRNLLRRPRVE 131
            RELR E + + ++ +T R + +D++LGLE+GADDY+TKPF PREL +R RNLL R  + 
Sbjct: 66  ARELR-EQADVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR-SMH 123

Query: 132 APAPADQSRYA---VFGPWRLDLLQRRLIAPDDRLVMLSSAEFRLLSRFIEEPNVVLARE 188
           A    ++ R     VF  W LD+  R L++PD     L  +EFR L  F E P  +  R 
Sbjct: 124 AGTTQEEKRSVEKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGKIQTRA 183

Query: 189 TLLPER--RATAAFDRTIDLQVSRLRQKLAGATGGADLILTVRGEGY 233
            LL +   R     DRT+D+ + R+R+     +G  ++I T+ GEGY
Sbjct: 184 DLLKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGY 230