Pairwise Alignments

Query, 377 a.a., RND efflux system, membrane fusion protein from Sphingobium sp. HT1-2

Subject, 373 a.a., acriflavin resistance protein from Sinorhizobium meliloti 1021

 Score =  193 bits (491), Expect = 6e-54
 Identities = 124/370 (33%), Positives = 198/370 (53%), Gaps = 7/370 (1%)

Query: 7   LRSLRVAPIAL-CILITACG---QEKAPKKGPVEVGVVTLAAQNVTVSSELPARTVSTMQ 62
           +R  RV   AL C L+T  G        ++ P  V V   A  ++  S +L  + V+  +
Sbjct: 1   MRVSRVLAAALSCGLLTTIGIVAGNAYAQQPPPAVNVAPAAIMDLRESVDLTGKVVAVQK 60

Query: 63  SEVRPQITGVIQKRLFTEGSMVTAGQPLYQIDERLYRASRDEAQAALVSAQATAVAAQAK 122
            ++R +++G ++K  F +G  V+AG  LYQ+++  YRA+  E   ++ +A+A    A  +
Sbjct: 61  VDIRARVSGFLEKVNFEDGQKVSAGTVLYQVEDGAYRAALQEIDGSIAAAEAQRDLAVLE 120

Query: 123 AQRYRGLGDTEAVSAQDRDDVIATARQAAAAVGQARASLDTANVNLTFTQVRAPISGRIG 182
             R + L  T  V+    D   A  ++A A + + + S   A +NL++T++ AP  G +G
Sbjct: 121 RDRAQRLIATNTVAQATLDTANAQVKKAEADILRLKGSKQNAELNLSYTKILAPFDGVVG 180

Query: 183 RTLFTPGALVTASQTDPLTTIQQLDPIYVDVTQSSSQLLQLRRSLAAGKTLPASATIRLK 242
            T    GALV A  +  L T+ +LDPIYV+   ++S     R  +  G+ + + A + + 
Sbjct: 181 LTTVDVGALV-APDSGSLVTLTRLDPIYVEFPVATSLYFSYRERVEKGE-MSSGANVSIT 238

Query: 243 LDDGTEYPLEGRIEFAEPIVDVDSGTVTLRARFPNPDGMLLPGMFVRVVAPQSVVPGAIL 302
           L +GT+YP +G I+F    V   + TVT+RA FPNP G LL G  VRVV  QS     + 
Sbjct: 239 LPNGTDYPEKGTIDFVASTVSQGTDTVTVRAEFPNPGGTLLDGTLVRVVLEQSDPQDVLA 298

Query: 303 APQQGIARDAKGNATALVVTKDNKVERRTVTAAQAIGDKWLITAGLKAGDRLIVEGTDKV 362
            PQQ + RD +G A  +VV  ++KVE R V  +++   + ++  GLK G+ +I EG  KV
Sbjct: 299 VPQQAVQRDQQG-AFVMVVDANSKVELRRVDVSRSSRGQAVVAKGLKEGENVITEGVGKV 357

Query: 363 QPDDKVKPVA 372
           +P   V  VA
Sbjct: 358 RPGIVVDAVA 367