Pairwise Alignments

Query, 420 a.a., CzcABC family efflux RND transporter, outer membrane protein from Sphingobium sp. HT1-2

Subject, 408 a.a., Outer membrane efflux protein from Pseudomonas syringae pv. syringae B728a

 Score =  152 bits (383), Expect = 2e-41
 Identities = 121/393 (30%), Positives = 185/393 (47%), Gaps = 21/393 (5%)

Query: 27  VAGASPYTLDQAVAAAGGSAPAAEAAQANVEAARAARTVAGLRPNPTVQTQVENIAGSGP 86
           +A A   +L QA+ AA    P   AAQ  +  A   R  AGL PNPTV  +VE+      
Sbjct: 18  MAMAQGISLPQALEAAFARNPELAAAQWEIGVAEGDRQQAGLIPNPTVSWEVEDTRRE-- 75

Query: 87  YRGVGSAESTVSMAVPIELGGKRSARIAVANAQTDKALLVSAITQADIRLQITQLYIEAA 146
                ++ +TV ++  +ELGGKR ARI  A+   D A L       ++R ++ Q +  AA
Sbjct: 76  -----TSTTTVMLSQALELGGKRGARIEAASKGQDAARLELERRGNELRAEVVQAFYAAA 130

Query: 147 AAERRVQTARDQARIAGDAANAASVRVKAGRASPIEEQRANVAKINADAELVRTIRLAQA 206
            A+  ++ AR    +A      A  RV+AG+ SP+E  RA V     D      +R A+ 
Sbjct: 131 RAQAGLELARQSRTLAERGLEVAEGRVRAGKVSPVEATRAQVQLAETDL----LVRRAET 186

Query: 207 SRANLERRIGQPMGGPLDTAWLERLP-RGYGP-EVPPSAVGTLAL-AAADADLAVADANV 263
            + N  R + +  G PL  A  ERL      P ++PPSA    AL  +A+  LA      
Sbjct: 187 LKINSNRELARTTGSPL--ASFERLDYSDLSPGKLPPSAKLLTALNQSAELRLAQTQIEQ 244

Query: 264 RLA-----NSQRVPNLEAGPGLRRLSATNDTALIFTVTMPIPIFNSGKAAVAQARAQRNQ 318
           R A      ++R+P+L    G +      +   +  ++MP+P+F+  +  V  A  + +Q
Sbjct: 245 REAALGSERAKRIPDLTVSVGSQYSREERERVNVVGLSMPLPLFDRNQGNVLAASRRADQ 304

Query: 319 VEAQKRMTALDVEQAITDAQTSASNAAVTAQTATGPALEAAQEAARIARIGYREGKFGQL 378
               +    L +      A    + AA   ++     L AAQ A   A  G+  GKFG L
Sbjct: 305 SRDLRNAVELKLRTQTQSALDQWTTAAQEVESFDRVILPAAQRAVDTATRGFEMGKFGFL 364

Query: 379 DLLDAERTLAQTRLAAIDALASYQNARAQLERL 411
           ++LDA+RTL   R   +++LA+   AR  +ER+
Sbjct: 365 EVLDAQRTLISARNQYLESLATATEARVAIERI 397