Pairwise Alignments

Query, 420 a.a., CzcABC family efflux RND transporter, outer membrane protein from Sphingobium sp. HT1-2

Subject, 427 a.a., outer membrane efflux protein (RefSeq) from Shewanella sp. ANA-3

 Score = 68.2 bits (165), Expect = 5e-16
 Identities = 88/421 (20%), Positives = 164/421 (38%), Gaps = 27/421 (6%)

Query: 13  SCVAVAQAQEMPA-AVAGASPYTLDQAVAAAGGSAPAAEA----AQANVEAARAARTVAG 67
           S + +      PA AV+  +P TL  A A         E     +Q  V   R  +   G
Sbjct: 19  SSIVLGMCLVFPAVAVSNEAPQTLTLADAVTLTLLQHPELQIFNSQQRVMEGRIQQASVG 78

Query: 68  LRPNPTVQTQVENIAGSGPYRGVGSAESTVSMAVPIELGGKRSARIAVANAQTDKALLVS 127
            RP   +   +E+  G+G +  + S +ST+S +  ++      +R+  A  +  +  +  
Sbjct: 79  ERPE--IGLMIEDALGTGEHSALKSMQSTLSFSWLLQ-QDLIDSRVNTAKTEATQLDIEK 135

Query: 128 AITQADIRLQITQLYIEAAAAERRVQTARDQARIAGDAANAASVRVKAGRASPIEEQRAN 187
            I   D+  Q+ + +I+    + R++      + A +     + RV+AG++S +E Q A 
Sbjct: 136 QIKALDLSSQVAKHFIDLLVKQERLKLNLIAEKQAKEVVKTVAKRVQAGKSSAVETQLAK 195

Query: 188 VAKINADAELVRTIRLAQASRANLERRIGQPMGGPLDTAWLERLPRGYGPEVPPSAVGTL 247
              I     +       +AS+  L  + G+P         L  +P        PS    L
Sbjct: 196 AELIRRGLAVEDIEHELKASQYQLASQWGKPKASYRFNGNLLDMP------AVPSVDSQL 249

Query: 248 ALAAADADL-------AVADANVRLANSQRVPNLEAGPGLRRLSATNDTALIFTVTMPIP 300
            L               +A + + LA  +  P  +   G+RR  A++D  L+  +++P  
Sbjct: 250 NLLKKHPRFQQFATAQRIAQSQMELARIEAKPQWQVTAGVRRYEASDDFGLVAGISIPWG 309

Query: 301 IFNSGKAAVAQARAQRNQV--EAQKRMTALDVE-QAITDAQTSASNAAVTAQTATGPALE 357
             +     +A  +AQ++ +  E    M A D +   +      +++   T ++   P LE
Sbjct: 310 SSDRNAGTIAALQAQQDVLANEQNALMQAQDAQLYVLLQEMAHSAHVIDTVRSDIVPTLE 369

Query: 358 AAQEAARIARIGYREGKFGQLDLLDAERTLAQTRLAAIDALASYQNARAQLERLTAPAPE 417
            A   A  A   + +G        D  R L   +   +DA  S      +++RLT  +  
Sbjct: 370 KALSEASNA---FDKGLLSYNQYNDVYRELLSAQYQLLDAFESLHLQHIEIQRLTGTSIS 426

Query: 418 Q 418
           Q
Sbjct: 427 Q 427