Pairwise Alignments

Query, 334 a.a., nucleoid-associated protein NdpA from Sphingobium sp. HT1-2

Subject, 333 a.a., nucleoid-associated protein from Vibrio cholerae E7946 ATCC 55056

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 67/327 (20%), Positives = 147/327 (44%), Gaps = 16/327 (4%)

Query: 9   IHDLNRSDAGYSVALSKKLLDVTDT-TLRVISTVYELYNSRTSKSHGRFTTAEGSPTEGQ 67
           +H L ++D    V   +      DT T  +++ ++ ++N++  K  G F +      + +
Sbjct: 10  LHQLRKNDNDELVVNYRAESLRNDTSTENLVAELHRVFNAKAGKGFGCFKS------DSE 63

Query: 68  IRAYVEAKEKD---FLGLTGKMMDNLAREAGKKSASVGGHVFFAHFRRDGSDFMLVTVVT 124
            + +++   +    F   + +    L  E  K   +  G +  A ++   +D++ + ++ 
Sbjct: 64  FQLWLQEMRRGTLPFYEFSQQSAQRLKNELAKYPFADEGILVMAEYQSLATDYLFIGLLP 123

Query: 125 DKLSAALTKNHGMEDVEHLDLDGFRFAGRINLTAW-ADKQD-RYLSFLKGK--GSISDYF 180
              S  +T+   +   ++LD++      RI+L+++  DK+  RYLS++KG+    ++D+F
Sbjct: 124 LNQSLKVTEGLDISATDYLDINKMDIVARIDLSSYETDKESKRYLSYIKGRVGRKVADFF 183

Query: 181 RDFLGCDSAVLERKDTQSLVDALKEFTLTEKMVDTEATAFLSDALDYLGKANKAKEPVDF 240
            DFL  D  +  ++  Q L+ A+++F    K    E  ++     +Y     KA + V  
Sbjct: 184 LDFLQADIGLDTKQQNQVLMQAVEDFCADAKFEKEEVISYKKQVYEYCNDQIKAGDEVRV 243

Query: 241 EAMANRLMPKEPG-RLSKFLANTDRQLNEGYVPNASALKALVKVTAKTKMWSVEFTREAI 299
           + ++  L P   G     F      QL E +  + S ++ L K        ++ F    +
Sbjct: 244 QELSGELPPSNEGVNFFDFTREQGYQLEESFPADRSTVRKLTKYVGAGGGLNLSFDSLLL 303

Query: 300 DQSKVVFDKDKKSLTLMDVPDELINQM 326
            + +V +D +  +LT+   P  L +Q+
Sbjct: 304 GE-RVFYDPETDTLTIKGTPPNLRDQL 329