Pairwise Alignments

Query, 722 a.a., Helicase PriA essential for oriC/DnaA-independent DNA replication from Sphingobium sp. HT1-2

Subject, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

 Score =  393 bits (1009), Expect = e-113
 Identities = 256/741 (34%), Positives = 376/741 (50%), Gaps = 42/741 (5%)

Query: 4   ARVLLLNAALGPLDYRIPHGMTARPGSIVVAPLGPRQLVGVVWDEESFPDVETVGDNRLR 63
           ARV L        DY IP  +    G  V  P G + LVG+V   +S          +L+
Sbjct: 6   ARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIV---QSLTHQSDFPIEQLK 62

Query: 64  NLLEVLD-APPLPETLRRLIEWTADYYLAPPAAVLRMALASMSALEGTRTVIEYRATGQL 122
           ++  VLD AP  P+ L+ L+ W + +Y  P       AL   +  +G    +      +L
Sbjct: 63  SVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPG-ALRKGKAAELTSHKEWRL 121

Query: 123 PDRMTEQRTQAMERIGDRQGLVRELAMIGG----------VSDTVIRGLVKAGAFEPVEV 172
                EQ  Q ++R   +Q  V  L   G           VS T ++ LV+ G  E  E 
Sbjct: 122 TALGQEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVSSTTLKALVEKGWIECEER 181

Query: 173 S-VYTPFPEPDPAHAP-PALSEQQMAAATDMADAVRAHE-FAPFLLDGVTGSGKTEVYFE 229
             V  P+P+   A    P L+++Q  A      AV + + F  FLL+GVTGSGKTEVY  
Sbjct: 182 KPVARPWPQELEAKVDKPRLNQEQAIAIA----AVNSQQGFGCFLLEGVTGSGKTEVYLN 237

Query: 230 AIAAAIRAGKQTLVLLPEIALTEPFLERFEKRFGTVPVNWHSGLRQSERRRAWRAIAAGE 289
            I   +  G+Q LVL+PEI LT   + RF +RF       HS L  +ER  AW A     
Sbjct: 238 LITPVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKV 297

Query: 290 ARVVVGARSALFLPYPNLGLIVVDEAHEASFKQEEGVHYHARDVAVMRGLIEHFPVVLAS 349
           A +V+G RSAL  P+  LG+I+VDE H++S+KQ++ + YHARDVAVMR  +E+ P+VL S
Sbjct: 298 AGIVIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGS 357

Query: 350 ATPAIETRHQVDLGRYREIKLPARFGGA-----QMPDIEGINLLTDPPERGRWIAPPLVV 404
           ATPA+ET H    G+Y  ++L  R G A        D++G+ L     E G  ++ PL+ 
Sbjct: 358 ATPALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYL-----ESG--LSAPLIA 410

Query: 405 AMEEVLAKGEQSLLFLNRRGYAPLTLCRHCGYRFQCPNCTSWMVEHRLTKRLACHHCGHV 464
            M   L+ G Q +LFLNRRG++P  +C  CG+  +C  C ++   H+ +  + CHHCG  
Sbjct: 411 EMRRHLSAGNQVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQ 470

Query: 465 IPAPRFCPECKEEDSLVACGPGVERIADEVKALWPQARVAIATSDTLHSPARAADFVKSV 524
            P    C  C     LV  G G E++  ++  L+P+ R      D+          + ++
Sbjct: 471 RPVLHQCKGC-GSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAI 529

Query: 525 EAGDIDIIVGTQLITKGYHFPNLTLVGVIDADLGLEGGDLRASERTFQQIMQVAGRAGRG 584
             G+  I++GTQ++ KG+HFP++TLV ++D D  L   D RASER  Q  +QVAGRAGR 
Sbjct: 530 RKGEYQILIGTQMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRA 589

Query: 585 EKPGHVFIQTRMPDAEVIQALIAGDSERFYLIETENRRRANAPPFGRFAAIIISSEDSDE 644
            KPG V +QT  P+  ++QAL+  D   F L   E R+ A  PP+   +     +  + +
Sbjct: 590 SKPGEVVLQTHHPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQ 649

Query: 645 AAQTARLIGKSA---PQVEG-MRVYGPAPAPLSVLRGRHRHRLLIHATRQVDIQSVI--- 697
                R + ++    P  +    V GP PAPL+   G+ R +LL+    +  +Q ++   
Sbjct: 650 VEDFLRQVRETLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSA 709

Query: 698 REWLGNLVWKSTTRVAVDVDP 718
           R  L  L   S  R ++D+DP
Sbjct: 710 RPALQQLPLASKVRWSIDIDP 730