Pairwise Alignments

Query, 548 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

Subject, 542 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Pseudomonas stutzeri RCH2

 Score =  131 bits (329), Expect = 8e-35
 Identities = 132/545 (24%), Positives = 228/545 (41%), Gaps = 34/545 (6%)

Query: 11  PPLAQEPGQGAQTIPAYLDAVRTRHGARDAVVMRTADRRICWSYDELHARSVAVARALIA 70
           P +   P     TI   L  +  R  + + + ++  +RR  WS+  L   +  VA  L+A
Sbjct: 3   PTVEVHPSIHRNTIGDALQRIAMR--SPEQIALQYRERR--WSFQALDRAANRVANHLLA 58

Query: 71  AGLGKDGRVGVLMANRPEYLASVFGIAMAGGVTVALSSFSSAEELSHLVQASAIGILLFD 130
            GL K  RV     N   YL        AG + V ++   +  EL++++  S    L  D
Sbjct: 59  LGLSKADRVAAYGKNSDAYLILWLACTRAGLIHVPVNYSLTEHELAYVLDQSGARALFVD 118

Query: 131 TRVMKKDFAAMLAGIDKGPFLHRLIQLDSVTDADPAAPGYEGWDAFLASGAAV---PDTQ 187
                    ++   +D+ P   +L    S+   +  +   +     +A+G+A    P+  
Sbjct: 119 D--------SLKGLVDRIPAQRQLAIRGSLHSNETTSDRSD--ILRIATGSACDLPPEVD 168

Query: 188 VAQRAATVTPSDHGGIFFSSGTTSLPKGIVHAQRAFCIQWWRWPRVFAMREPVVSWTGNG 247
           +A+       +D   I ++SGTTS PKG +H+ R+   ++        ++          
Sbjct: 169 IAE-------TDVVQILYTSGTTSDPKGAMHSHRSLMTEYSSCLLHLDIKASDRCLAALP 221

Query: 248 LFWSGNISLVIGTALSTGGTAVLQPVFDAAAALDVIEQERVTFLTGRPHQWARVQAADNW 307
           L+ S  + +    AL  G  + L         L +++ E++      P  W  +   + +
Sbjct: 222 LYHSAQMHVFTMPALLAGAFSCLTDTPTPEEILRLLKTEQLNSFFAPPTVWIALLRHEQF 281

Query: 308 ASADLSSLKYVTKGELIGEHPTV-DTDWTTPMA-----FGTTETMTICTAFDADMSDAEY 361
             A L  ++ +  G  I   P   +     P +     +G +E   + T    +    E 
Sbjct: 282 VEAQLRHVQKLYYGASIMPEPIARELGARLPQSGLYNCYGQSEIAPLATVLTPE-EHRER 340

Query: 362 GGSAGAPLPGNSLKIVDPLTRAILPVGQAGEMCIKGPTLMSGYLGKLPE--ECFDAEGYY 419
             S G P+     +I+DP T      G AGE+  + P LM GY  K  E  E F A+G++
Sbjct: 341 PTSCGRPVSNVLTRIIDPSTGEECAPGVAGELVHRSPQLMVGYWEKPAETAEAF-ADGWF 399

Query: 420 RTGDGGRVDEQGRFFWEGRLTDMIKTGGANVAPEEVDAAIATFPGVKRSQTVGVPDDLLG 479
            +GD G  D QG  +   R+ D++ TGG  VA  +V+ A+   P V     +GVPD    
Sbjct: 400 HSGDLGYRDAQGYIWIVDRIKDIVNTGGVLVASRDVEEALYRHPHVAEVAVIGVPDQKWI 459

Query: 480 EMVVACIVPVDGARVTESDLIAHLKARMASFKVPRRVLLLDEADFALTGNEKAKAADIRA 539
           E + A +V    A +    L+ H +A +A FKVP+ V  +++     +G    +   ++ 
Sbjct: 460 EAIAAVVVLKQNATLDAQALLHHARAHLAPFKVPKHVHFVEQLPKNSSGKLLKRVLRVQF 519

Query: 540 VAVAR 544
            A AR
Sbjct: 520 GASAR 524