Pairwise Alignments

Query, 548 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  171 bits (433), Expect = 7e-47
 Identities = 135/522 (25%), Positives = 237/522 (45%), Gaps = 31/522 (5%)

Query: 47  DRRICWSYDELHARSVAVARALIAAGLGKDGRVGVLMANRPEYLASVFGIAMAGGVTVAL 106
           DR + ++Y E   R+  +A+ L+  G+ K   +G+   N P++L  +F  A  G V V +
Sbjct: 29  DRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATAKIGVVLVTV 88

Query: 107 SSFSSAEELSHLVQASAIGILLFDTRVMKKDFAAMLAGI--------------DKGPFLH 152
           ++   + EL+++++ S +  L         ++  +L  +              ++ P+L 
Sbjct: 89  NTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTSQRGKLNSEEFPYLK 148

Query: 153 RLIQLDSVTDADPAAPGYEGWDAFLASGAAVPDTQVAQRAATVTPSDHGGIFFSSGTTSL 212
            +I +           G       +  G  V D ++ +    +   D   + ++SGTT  
Sbjct: 149 NVIYVGQEKHR-----GMYNTTELMLLGNYVSDEKLIEAKKGLDSDDVINMQYTSGTTGF 203

Query: 213 PKGIVHAQRAFCIQWWRWPRVFAMREPVVSWTGNGLFWSGNISLVIGTALSTGGTAVLQP 272
           PKG++   +      +         E         LF    I L +   L+ GGT V+  
Sbjct: 204 PKGVMLTHKNILNNGYYIGEKQKFTEEERLCLPVPLFHCFGIVLGVLALLTHGGTLVMLE 263

Query: 273 VFDAAAALDVIEQERVTFLTGRPHQWARVQAADNWASADLSSLKY-VTKGEL--IGEHPT 329
           +FD    L  I++E+ T + G P  +    +   +   DLSSL+  +  G    I     
Sbjct: 264 IFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEMFDLSSLRTGIMAGSTCPIEAMKK 323

Query: 330 VDTDW---TTPMAFGTTETMTICTAFDADMSDAEYGGSAGAPLPGNSLKIVDPLTRAILP 386
           V +D       +++G TE   + T    D    +   S G  +P   +KI+DP T   L 
Sbjct: 324 VMSDMYMREITISYGLTEASPVFTMTSVDDPFEKRVESVGKAMPHCEVKIIDPETGETLA 383

Query: 387 VGQAGEMCIKGPTLMSGYLGKLPE---ECFDAEGYYRTGDGGRVDEQGRFFWEGRLTDMI 443
            G  GE+C +G  +M GY  K+PE   E  + +G+  +GD    DE G +   GR+ DMI
Sbjct: 384 PGNVGEICCRGYNVMKGYY-KMPEKTAEVIEKDGWLHSGDLAVEDEDGYYKIVGRIKDMI 442

Query: 444 KTGGANVAPEEVDAAIATFPGVKRSQTVGVPDDLLGEMVVACIVPVDGARVTESDLIAHL 503
             GG N+ P E++  + T PG+  +Q VG+PD+  GE+V A ++P +G  + E D+    
Sbjct: 443 IRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFVIPKEGYEIKEEDVRDFA 502

Query: 504 KARMASFKVPRRVLLLDEADFALTGNEKAKAADIRAVAVARL 545
             ++A +KVP+ V +++E  F +T + K +   +  +AV  L
Sbjct: 503 LEKIARYKVPKHVFVVEE--FPMTASGKIQKFKLTELAVELL 542