Pairwise Alignments

Query, 406 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 1010 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  119 bits (298), Expect = 4e-31
 Identities = 65/164 (39%), Positives = 99/164 (60%), Gaps = 1/164 (0%)

Query: 242 ILERQATRDPLTGLGNRAMFERELAATMAQADEGDTSFAVIYVDVNRFKQVNDSHGHDAG 301
           I+ +QA  DPLTGL NR M    L   + + D   + FA++++D++ FK+VND+ GHD G
Sbjct: 576 IIWKQANYDPLTGLPNRRMLLEYLNTEILRIDRNHSHFALMFLDLDFFKEVNDTLGHDMG 635

Query: 302 DVMLIVIAARLRMALRPGDMAFRLGGDEFALILAAGATRSEADQMSAQIGAGMTQPIMLP 361
           D++L   A RL+  +R  D+  RLGGDEF ++L+   + S  ++++  I   + +P  L 
Sbjct: 636 DLLLQETAKRLKGCIRESDVVARLGGDEFTVVLSGIDSPSGVERVAQSILERIAEPYSLG 695

Query: 362 SGVSIRSSLSIGSALYPQDSVDPRALLRHADAAMYAAKARGDGR 405
              +  S+ SIG  +YP D+     LL+HAD AMYAAK +G  R
Sbjct: 696 DETAYISA-SIGITIYPDDATSIEGLLKHADQAMYAAKEQGRNR 738