Pairwise Alignments

Query, 509 a.a., ATP synthase alpha chain (EC 3.6.3.14) from Sphingobium sp. HT1-2

Subject, 513 a.a., ATP synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

 Score =  561 bits (1447), Expect = e-164
 Identities = 292/518 (56%), Positives = 378/518 (72%), Gaps = 19/518 (3%)

Query: 1   MDINAAEISKVIKDQIANFGTEAQVSEVGSVLTVGDGIARVHGLDNVQAGEMVEFANGVQ 60
           M +N+ EIS +IK +I +F   ++    G++++V DGI R+HGL +V  GEM+E      
Sbjct: 1   MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLADVMQGEMIELPGNRY 60

Query: 61  GMALNLEADNVGIVIFGSDAEIKEGDTVKRTGTIVDVPVGKGLLGRVVDGLGNPIDGKGP 120
            +ALNLE D+VG V+ G  A+++EG  V  TG I++VPVG  LLGRVV+ LG PIDGKGP
Sbjct: 61  ALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPIDGKGP 120

Query: 121 IEYTERKRVEVKAPGIIPRKSVHEPVQTGLKAIDALVPVGRGQRELIIGDRQTGKTAVAI 180
           I   +   VEV APG+I RKSV +PVQTG K++D+++P+GRGQRELIIGDRQTGKTA+AI
Sbjct: 121 IGAKQTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALAI 180

Query: 181 DTFINQKGINAGDDESKKLYCIYVAVGQKRSTVAQIVKQLEENGAMEYSIVVAATASEPA 240
           D  INQK  N+G      +Y IYVA+GQK ST+A +V++LEE+GA++ +IVV A+ASE A
Sbjct: 181 DAIINQK--NSG------IYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESA 232

Query: 241 PLQYLAPYTGVTMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 300
            LQYLAPY+G  MGE+FRD G  A+IVYDDLSKQAVAYRQ+SLLLRRPPGREA+PGDVFY
Sbjct: 233 ALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFY 292

Query: 301 LHSRLLERAAKMND-----------ANGNGSLTALPIIETQAGDVSAYIPTNVISITDGQ 349
           LHSRLLERAA++N+               GSLTALPIIETQAGDVSA++PTNVISITDGQ
Sbjct: 293 LHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQ 352

Query: 350 IFLETNLFYQGIRPAINVGLSVSRVGSAAQTKAMKKVSGSIKLELAQYREMAAFAQFGSD 409
           IFL+T LF  G+RPA++ G+SVSRVG AAQTK +KK+SG I+  LA YRE+AAFAQF SD
Sbjct: 353 IFLQTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRELAAFAQFSSD 412

Query: 410 LDASTQKLLNRGARLTELLKQGQFSPLPFEEQTASIFAGTNGYLDGIPVKDVTRYEELML 469
           LD +T++ L  G ++TEL+KQ Q++P+   +Q   IFA   GYL  + +  V  +E  +L
Sbjct: 413 LDEATKRQLTHGQKVTELMKQKQYAPMSVFDQALVIFAAERGYLTDVELNKVLDFEAALL 472

Query: 470 AYLRHDHPEVLTAIRDSKDLGDDAKGKLKAALDSFGKT 507
           +Y R  + E+   I  +    D+ + +LK  +D F  T
Sbjct: 473 SYARAHYAELAAQIDKTGAYNDEIEAQLKKLVDDFKAT 510