Pairwise Alignments

Query, 509 a.a., ATP synthase alpha chain (EC 3.6.3.14) from Sphingobium sp. HT1-2

Subject, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

 Score =  149 bits (375), Expect = 3e-40
 Identities = 109/391 (27%), Positives = 186/391 (47%), Gaps = 16/391 (4%)

Query: 53  VEFANG-VQGMALNLEADNVGIVIFGSDAEIKEGDTVKRTGTIVDVPVGKGLLGRVVDGL 111
           VE  NG ++   +    DN+ ++       +  G  V    T   +PVG  LLGRV+DG+
Sbjct: 49  VETMNGEMEAEVVGFSGDNLFLMPSEQIIGVLPGAKVTPITTESGLPVGMELLGRVIDGV 108

Query: 112 GNPIDGKGPIEYTERKRVEVKAPGIIPRKSVHEPVQTGLKAIDALVPVGRGQRELIIGDR 171
           GNP+DG GPI   +R  +       + RK ++EP+  G+KAI+ L+ VG+GQR  +    
Sbjct: 109 GNPLDGLGPIYTDQRASLNAIPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGS 168

Query: 172 QTGKTAVAIDTFINQKGINAGDDESKKLYCIYVAVGQKRSTVAQIVKQLEENGAMEYSIV 231
             GK   ++   +  +G  A          +   +G++   V + ++++      + S+V
Sbjct: 169 GVGK---SVTLGMMTRGTTA-------QVVVVGLIGERGREVKEFIEEILGVDGRQRSVV 218

Query: 232 VAATASEPAPLQYLAPYTGVTMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGR 291
           VAA A     ++     T +T+ E+FRD G+  +++ D L++ A A R+++L +  PP  
Sbjct: 219 VAAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPAT 278

Query: 292 EAYPGDVFYLHSRLLERAAKMNDANGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIF 351
           + YP  VF     L+ERA   N     GS+TA   + T+  D+   I     +I DG I 
Sbjct: 279 KGYPPSVFAKLPALVERAG--NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIV 336

Query: 352 LETNLFYQGIRPAINVGLSVSRVGSAAQTKAMKKVSGSIKLELAQYR---EMAAFAQFGS 408
           L   +   G  PAI+V  SVSRV     T     +S +++  L+  R   ++ +   +  
Sbjct: 337 LSREMADAGHYPAIDVEKSVSRVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKP 396

Query: 409 DLDASTQKLLNRGARLTELLKQGQFSPLPFE 439
             D +         +L + L+Q     +P++
Sbjct: 397 GTDKAIDAAFTLKPKLDQYLQQAMKETVPYD 427