Pairwise Alignments

Query, 175 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 227 a.a., RNA polymerase sigma factor from Sinorhizobium meliloti 1021

 Score = 78.6 bits (192), Expect = 7e-20
 Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 12/165 (7%)

Query: 10  MEADLRAMRRYARALSRDHVVADDVVQDAVMRAIERRDQFQPDRSRRRWLLAIVHNVFIS 69
           M+A  R + R AR++ R+   A+DV+Q+A +RA  R + F+ D +   WL  IV N  + 
Sbjct: 26  MQAHNRKLYRIARSILRNDSDAEDVLQEAYVRAFTRFEDFRGDAAITTWLARIVINEALG 85

Query: 70  AKRREAAETRRNLAFAQIQVDH----------ADPDQEV--RADLMQVARAFADLPDHQR 117
             R+   + R      Q Q             +DP++ +  R  L  V R   DLPD  R
Sbjct: 86  RLRKGRRQMRLAKYMRQSQEAEIIAFPLNSGISDPEKTMAQRQILDLVERLTDDLPDTYR 145

Query: 118 AVMHLTVVEGLSYQESADLLGIAVGTVMSRLARARATLRQDRDRQ 162
            V  L V+EGL  +E+A LLG+   T  +RL RAR  L++  +RQ
Sbjct: 146 TVFVLRVIEGLDNEEAAALLGLKPETARTRLHRARRILKEQLERQ 190