Pairwise Alignments

Query, 819 a.a., TonB-dependent receptor from Sphingobium sp. HT1-2

Subject, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

 Score = 63.2 bits (152), Expect = 5e-14
 Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 12/163 (7%)

Query: 12  ASAAFVTPAAFAAEAAQPAAADDQQASSPRGDVIVVTARRRQETAQEVPLAISVVKGDSI 71
           A+   V  A FA    +P+  ++          +VVTA R ++   EV  +++V++G+++
Sbjct: 8   AAVLSVLAAGFAHAETEPSHYEE----------VVVTANRIEQPLSEVAGSVAVLEGETL 57

Query: 72  EATGNFNIVKLQQLAPTLQVYTTNPRNTSVNIRGL-GVPFGLTSDGFEQGVGIYVDDVYN 130
           E  G   +       P + V     R  ++ IRG+ G    +  DG +   G    D+ N
Sbjct: 58  EKQGKTELYDALNQEPGVSVTGGAGRPQNITIRGMTGNRIAIVRDGIQSADGYGAADI-N 116

Query: 131 SRVAAATFDFLDVNQVEVLRGPQGTLYGKNTTAGAINITTNQP 173
            +    TF   +V Q++V++G   TLYG     G + I +  P
Sbjct: 117 DKYGRNTFSLSNVKQIQVVKGASSTLYGSGAIGGVVIIESKAP 159