Pairwise Alignments

Query, 483 a.a., Na+-driven multidrug efflux pump from Sphingobium sp. HT1-2

Subject, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  129 bits (323), Expect = 3e-34
 Identities = 109/435 (25%), Positives = 192/435 (44%), Gaps = 9/435 (2%)

Query: 11  LTQGPIASTLLTFAIPTLASNILQSLNGSINAIWVGRFLGPQALAATANANIIMFLMFSV 70
           L   PI   L    +P +   +   +   ++  ++   LG QALAA +    + F +  +
Sbjct: 19  LLSAPIPLVLRQMTVPMIFGLVAILMFNLVDTFFIS-LLGTQALAAISYTFPVTFAVNCI 77

Query: 71  VFGFGMASTVMIAQAVGARDMDAARRAFGSAVGFCFLLAMGVAVAGWFGGPALLHLLATP 130
             G G+  +  I + +G  D   A R     +    LL    +  G      L  LL   
Sbjct: 78  TMGIGVGLSTCIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGAS 137

Query: 131 PEAFDMALTYLRVIFVAMPASLLSVMMMMGLRGTGDARTPLIFMILSVAIDLVLNPVLIL 190
            E   +   Y+ V ++ +P  +L +     +R TGD +TP   M+L+  I+  L+P+LI 
Sbjct: 138 HELIPLIKEYMVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIF 197

Query: 191 GLGPIPAMGIGGSAAATAAAGFVSLIALVIYTYAKDLPLRLRGAELGYLRPAMDEMRVLS 250
           G GP P +GI G+A A+A +   +LI  +     ++  L +    L +LR   D+ + + 
Sbjct: 198 GYGPFPELGIQGAAIASAFSWLGALIGSLYLLIKREKLLAI--PSLPHLR---DDWQQIL 252

Query: 251 TKGLPMGLQMIVMSTSGLVMIGLVNREGFLVTAAYGAAQQIWTYLQMPAMAMGAAVSAMA 310
             G P  L   +   SG +++ +++  G    AAYGA Q+I + L +  M++ +A++   
Sbjct: 253 KIGTPAALSTAMNPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFM 312

Query: 311 AQNIGAGRWDRISRITGYGISYLLAITGAMVVVILIFHEAL-LALFLSHNQAVIDAAWNM 369
           AQN+GA    R     G  +S   ++   ++V I++   ++ LA   S  QAV D  W+ 
Sbjct: 313 AQNLGAQNPAR--SFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHY 370

Query: 370 QLLASWSFMLFGCTMILFGVMRANGVVVAPLLILVFTLFAVRLGFYYLAYPRIGADALWL 429
            L+   S+   G  M+L   + A    +         LF   L   ++       + L++
Sbjct: 371 LLVVPVSYGFQGVVMMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWIGGRLYNIEGLFI 430

Query: 430 SFPVGSAVSLTLAAL 444
              VG+ +   L  L
Sbjct: 431 GIAVGNILGGLLGYL 445