Pairwise Alignments

Query, 483 a.a., Na+-driven multidrug efflux pump from Sphingobium sp. HT1-2

Subject, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 72.0 bits (175), Expect = 4e-17
 Identities = 79/386 (20%), Positives = 145/386 (37%), Gaps = 5/386 (1%)

Query: 13  QGPIASTLLTFAIPTLASNILQSLNGSINAIWVGRFLGPQALAATANANIIMFLMFSVVF 72
           +G     L+  A+P    NI+ S  G ++ + +G+ LG   +AA   A    F+   ++ 
Sbjct: 12  RGDFFRRLIAIALPITLQNIMFSSRGLVDVLMLGQ-LGEAEIAAVGVAARATFVTTIMLV 70

Query: 73  GFGMASTVMIAQAVGARDMDAARRAFGSAVGFCFLLAMGVAVAGWFGGPALLHLLATPPE 132
           G      ++ AQ  GA D    R +           A    +   F    ++ L     +
Sbjct: 71  GVTTGGALLTAQYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLTTDSEQ 130

Query: 133 AFDMALTYLRVIFVAMPASLLSVMMMMGLRGTGDARTPLIFMILSVAIDLVLNPVLILGL 192
              +   YL +    M A      M +GLR          F  + +  ++VLN +LI G 
Sbjct: 131 VNALGSQYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWILIFGK 190

Query: 193 GPIPAMGIGGSAAATAAAGFVSLIALVIYTYAKDLPLRLRGAELGYLRPAMDEMRVLSTK 252
              PAMGI G+A AT  +G + +  L  Y Y K   +     ++  +       R L   
Sbjct: 191 FGFPAMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISRFLRL- 249

Query: 253 GLPMGLQMIVMSTSGLVMIGLVNREGFLVTAAYGAAQQIWTYLQMPAMAMGAAVSAMAAQ 312
            LP     ++ +        ++ + G    AA      + +      + M  A + +   
Sbjct: 250 SLPTTFNFLIWAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVGN 309

Query: 313 NIGAGRWDRISRITGYGISYLLAITGAMVVV-ILIFHEALLALFLSHNQAVIDAAWNMQL 371
            +GA  ++ +      G++    + G +V + + +    +L  F +      + +    L
Sbjct: 310 QLGAKNYEAV-YYQAIGVTACSVLVGIVVAIGLYLVQIPVLGAFTALTPETRELSEKFML 368

Query: 372 LASWSFMLFGCTM-ILFGVMRANGVV 396
           +     +L    M  + GV+RA G V
Sbjct: 369 ILCLGIVLRSFPMTAIVGVLRAGGDV 394