Pairwise Alignments

Query, 483 a.a., Na+-driven multidrug efflux pump from Sphingobium sp. HT1-2

Subject, 444 a.a., putative multi antimicrobial extrusion protein from Phaeobacter inhibens DSM 17395

 Score =  117 bits (293), Expect = 8e-31
 Identities = 108/438 (24%), Positives = 193/438 (44%), Gaps = 14/438 (3%)

Query: 9   RDLTQGPIASTLLTFAIPTLASNILQSLN-GSINAIWVGRFLGPQALAATANANIIMFLM 67
           ++LTQG +   L   + P ++  IL  L+ G  +A ++G+ LG   LAA      +   +
Sbjct: 4   KNLTQGAVWRALAAVSAP-MSLGILGVLSVGLADAYFLGQ-LGEAPLAAVGFIYPVTTAV 61

Query: 68  FSVVFGFGMASTVMIAQAVGARDMDA-ARRAFGSAVGFCFLLAMGVAVAGWFGGPALLHL 126
            S+  G    +   I+Q++G  D      R    A+    L+A  VA+  + G  AL  +
Sbjct: 62  TSLSIGLSAGANAAISQSLGRGDSAIETNRLSVHAIVLGTLVATLVALVFYLGAGALFSV 121

Query: 127 LATPPEAFDMALTYLRVIFVAMPASLLSVMMMMGLRGTGDARTPLIFMILSVAIDLVLNP 186
           +    +    A +Y     ++ P  +   ++    R  GD  T  + M+++ A+++ L+P
Sbjct: 122 MGAKDDVLAEAQSYAPFWALSFPFLVGMALLNAVFRAHGDGATSAVIMMVAAALNIALDP 181

Query: 187 VLILGLGPIPAMGIGGSAAATAAAGFVSLIALVIYTYAKDLPLRLRGAELGYLRPAMDEM 246
           VLI GLGP+P M   G+A ATA A  ++LI    Y     +   +R  E+ +       +
Sbjct: 182 VLIYGLGPVPEMSTAGAALATALARVLTLIGAFGYALRTGV---IRPPEV-FTDGIGGSV 237

Query: 247 RVLSTKGLPMGLQMIVMSTSGLVMIGLVNREGFLVTAAYGAAQQIWTYLQMPAMAMGAAV 306
           R +   GLP      +      ++       G  V A  GAAQ++ +   +P +A+ A +
Sbjct: 238 REVIRVGLPAAFSNAINPAGMAMVTAAAATLGDTVVAGLGAAQRVQSVALVPLLALSAGI 297

Query: 307 SAMAAQNIGAGRWDRISRITGYGISYLLAITGAMVVVILIFHEALLALFLSHNQAVIDAA 366
             +  QN GA +  R          + +    AM +V+ +F   +  L  S   A    A
Sbjct: 298 GPVVGQNWGADQQMRARLAVWQSWQFCIGYGLAMALVLTLFASDIAGLLTSDQGAAATTA 357

Query: 367 WNMQLLASWSFMLFGCTMILFGVMRANGVVVAPLLILVFTLFAVRLGFYYLAYPRIGADA 426
             ++++ SWSF+ +G  +     M A    V  + + +  +FA+     Y+    +G   
Sbjct: 358 QYLRIV-SWSFLGYGVLVTANAAMNARSKAVWSMGLSLMRIFAI-----YVPLAWLGVWI 411

Query: 427 LWLSFPVGSAVSLTLAAL 444
              +  +G+AV   LAA+
Sbjct: 412 FGYAGILGAAVIANLAAV 429