Pairwise Alignments

Query, 483 a.a., Na+-driven multidrug efflux pump from Sphingobium sp. HT1-2

Subject, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

 Score = 84.3 bits (207), Expect = 8e-21
 Identities = 77/383 (20%), Positives = 174/383 (45%), Gaps = 16/383 (4%)

Query: 9   RDLTQGPIASTLLTFAIPTLASNILQSLNGSINAIWVGRFLGPQALAATANANIIMFLMF 68
           + L    I + ++ + IP++A  ++  + G I+ I++GR +G + LA    +  ++  + 
Sbjct: 5   KKLENEKINNLMIRYVIPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVLIAIS 64

Query: 69  SVVFGFGMASTVMIAQAVGARDMDAARRAFGSAVGFCFLLAMGVAVAGWFGGPALLHLLA 128
           S+    G  S+ +I+ ++G +D   A     +A+ +  L+++ +   G+     ++  + 
Sbjct: 65  SIGVMIGAGSSAIISISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVISFMN 124

Query: 129 TPPEAFDMALTYLRVIFVAMPASLLSVMMMMGLRGTGDARTPLIFMILSVAIDLVLNPVL 188
                    + Y ++I +   A + ++ +   LR  G  +  +I + L    +++L+ +L
Sbjct: 125 LSKNLESYVVGYSKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIILDYML 184

Query: 189 ILGLGPIPAMGIGGSAAATA-AAGFVSLIALVIYTYAKDLPLRLRGAELGYLRPAMD--- 244
           I+    +   G+ G+AAAT  A G  S++ L  +   K         ++G   P ++   
Sbjct: 185 IV----VFNFGVMGAAAATVLAQGLGSILYLKHFLSGKS------NVKIGKNSPFLEFSL 234

Query: 245 EMRVLSTKGLPMGLQMIVMSTSGLVMIGLVNREGFLVTAAYGAAQQIWTYLQMPAMAMGA 304
             R+  T   P  +++       +  I  +     L  +AYG    I ++L M  + +  
Sbjct: 235 IKRIAKTGFSPFIMELAFGILMIVHNIQFMRYGSSLDVSAYGIVIYITSFLYMVYLGISE 294

Query: 305 AVSAMAAQNIGAGRWDRISRITGYGISYLLAITG-AMVVVILIFHEALLALFLSHNQAVI 363
            V  + + N GA +++R+  I    + ++ AI G    + IL F   L+ +F  H+  +I
Sbjct: 295 GVQPLISYNHGAKKFNRVFEILKKAV-FVNAILGICSFLTILKFPNLLIKIFNPHDTNLI 353

Query: 364 DAAWNMQLLASWSFMLFGCTMIL 386
                   + +++ ++ G +M+L
Sbjct: 354 ATTTIGLEIHNFAILIMGVSMVL 376