Pairwise Alignments

Query, 480 a.a., Type I secretion outer membrane protein, TolC family from Sphingobium sp. HT1-2

Subject, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (281), Expect = 2e-29
 Identities = 94/412 (22%), Positives = 187/412 (45%), Gaps = 8/412 (1%)

Query: 17  LLLSSSMAGVAHAETLQGALAKAYRTNPTLTGARAGQRATDENVPIQKAAGRPTANSQLQ 76
           + L+ +++    A+TL+ A++    +NP L  A    ++ + +      A  P  +    
Sbjct: 17  IALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAG 76

Query: 77  FQELVIRPSNSFLAPHRSAS-----ASGSIDVPIYSGGTVRNSVKAAETRVESGQANLRG 131
                I P+ S  + +R+       A+ ++   I+ G    N +       E+ +  L  
Sbjct: 77  IGYEAINPAES--SGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRYQLLA 134

Query: 132 TEASVFSQTVAAYMDVIRDIALVSLNAANVKVLEVNLQATNDRFEVGDVTRTDVAQSESR 191
             +++  +    Y+D  +   +++L+  N+ + +   +    R + G  +  DV Q E+R
Sbjct: 135 DASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQVEAR 194

Query: 192 LELARSDLQRAESNLITSRENYIAMVGEAPVDLESPPA-LPGLPADPDSAVRVALADNPD 250
           L  A S+L  A++NL      +  +VG+ PV LE P A    +P   ++A+ +A  ++P 
Sbjct: 195 LAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLENALNMAQENHPV 254

Query: 251 ILAAQKSREAARYDVKAAKGATLPTLSGFSQGSYTDYMDKDIAANKQAAVGATLTIPFYQ 310
           I  AQ   +AAR+  K +K    PTLS  +  S+ +       ++ + +    L    Y 
Sbjct: 255 IKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSDELSAMLRLRYNLYN 314

Query: 311 GGRPAAQVRQNQALESQAIERQIEVERGVISQARAAYAALQASLRTIQSSQKAVDAAELS 370
           GG  + +        +++ + + +  R V    R +++AL  +L+  Q     VD+A  +
Sbjct: 315 GGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSASKT 374

Query: 371 LEGVRAENSVGSRTILDILNAEQESLNAKVELVTARRNAYVAGFTLLAAMGH 422
           +   R +  +G RT+LD+LN E E   A+ + + AR     A + ++ A G+
Sbjct: 375 VVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMNASGN 426