Pairwise Alignments

Query, 333 a.a., putative integrase/recombinase from Sphingobium sp. HT1-2

Subject, 385 a.a., integrase-like protein from Sinorhizobium meliloti 1021

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 38/270 (14%)

Query: 71  VEAEAGIAPVTIGRRVAAINHHHKEAG----FPSPTARDAAGVIATMLAGVRRKYARRKE 126
           + A+   AP T+ RR+ + +   +  G    F +P+ + A       LA       R+++
Sbjct: 123 LRADGPHAPGTVQRRLTSWSILTRWRGLSGAFGAPSLKSAL-----RLAVRASNRPRQRK 177

Query: 127 QKAPAEADVLKAMLATIEGMGLRALRDRAILAVGMA-GAFRRSELAAMQLPDLAFAQSG- 184
            K     D+L  +L    G  L   RDRA+L    A G  RRSE+AA+++ DLA  +   
Sbjct: 178 SKKAVTLDILTKLLEACAGDRLVDARDRALLLAAFASGGRRRSEVAALRVEDLADEEPVR 237

Query: 185 -------------LRITIPQSKRDQEQVGQVIAIPEGRIIRPVNLLKHWLHAAGLSGLDP 231
                        L I + ++K       + + +    I RPV +LK WL  A +     
Sbjct: 238 ANPADENSPPLPCLSIRLGRTKTTTADENEHVLL----IGRPVTVLKRWLSDAQI----- 288

Query: 232 ATGKPRQGAVFRRLTRSDALTDNPITDKTVARLVKTAAAAAGLDPSLYSGHSLRAGFLTE 291
                + G VFRR+ +   +    +T ++V  ++K     AGLDP+L+S H LR+G+LTE
Sbjct: 289 -----KDGPVFRRIDQWGNIDRRALTPQSVNLVLKARCEQAGLDPALFSAHGLRSGYLTE 343

Query: 292 AASKRANLFKMKDHSRHKSLDTVADYVRSA 321
           AA++   L +    S HKS+   A Y  +A
Sbjct: 344 AANRGIPLPEAMQQSLHKSVTQAASYYNNA 373