Pairwise Alignments

Query, 679 a.a., Chaperone protein ClpB (ATP-dependent unfoldase) from Sphingobium sp. HT1-2

Subject, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

 Score =  833 bits (2153), Expect = 0.0
 Identities = 419/663 (63%), Positives = 528/663 (79%), Gaps = 2/663 (0%)

Query: 1   VQILARRTKNNPALMGEPGVGKTAIAEGLALRIANGDVPESLRDRRLMALDMGSLIAGAK 60
           +Q+L RRTKNNP ++GEPGVGKTAI EGLA RI N +VPE LR RR+++LDMG+L+AGAK
Sbjct: 191 IQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAK 250

Query: 61  YRGEFEERLKSVLDEVKGAEGDIILFIDEMHTLIGAGKGEGAMDASNLLKPALARGELHC 120
           YRGEFEERLKSVL+E+   EG+IILFIDE+HT++GAGKGEG+MDA N+LKPALARGELHC
Sbjct: 251 YRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHC 310

Query: 121 IGATTLDEYQKYVEKDPALQRRFQPVFVGEPTVEDTISILRGIKENYELHHGVRIADNAI 180
           +GATTLDEY++Y+EKDPAL+RRFQ V V EPTVEDTI+ILRG+KE YELHH V I D AI
Sbjct: 311 VGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAI 370

Query: 181 VAAATLSNRYIADRFLPDKAIDLMDEAASRIRMEVESKPEEIEGLDRRIIQLKIEEQALA 240
           VAAA+LS+RYI+DR LPDKAIDL+DEAAS IRM+++SKPE ++ L+R+IIQLKIE+QAL+
Sbjct: 371 VAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALS 430

Query: 241 KETDQASRDRLEALREDLANLEQQSAELTTRWQNERDKIASEGKIKEQLDAARVELEQAQ 300
            E D+AS  RL  L E+L   E+  AEL   W+ E+  ++    IK  L+ AR++LE A+
Sbjct: 431 NEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVAR 490

Query: 301 RAGDYAKAGELTYSRIPALEKSLE-DAQGQSNN-ALLREEVTSEDIAAVVSRWTGIPVDR 358
           RAGD  +  EL Y RIP LEK L+  AQ +     LLR +VT  +IA V+S+ TGIPV +
Sbjct: 491 RAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVLSKQTGIPVSK 550

Query: 359 MMEGERDKLLKMEEVIGKRVIGQKDAVLAVSKAVRRARAGLQDPNRPLGSFLFLGPTGVG 418
           M+E E++KLL+ME+V+ KRVIGQK+AV  V+ A+RR+RAGL DPNRP+GSFLFLGPTGVG
Sbjct: 551 MLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVG 610

Query: 419 KTELTKALAGFLFDDDAAMVRIDMSEFMEKHSVSRLIGAPPGYVGYDEGGVLTEAVRRRP 478
           KTEL K LA FLFD + AMVR+DMSEFMEKHSV+RL+GAPPGYVGY+EGG LTEAVRR+P
Sbjct: 611 KTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKP 670

Query: 479 YQVVLFDEVEKAHGDVFNVLLQVLDDGRLTDGQGRVVDFTNTLIILTSNLGSQFLANLGD 538
           Y V+L DEVEKAH DVFN+LLQVLDDGRLTDGQGR VDF NT++I+TSNLGS  +     
Sbjct: 671 YSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFA 730

Query: 539 GEDVEKVEPQVMDVVRGHFRPEFLNRLDEIILFHRLGQEHMGPIVEIQVARVGKLLKDRK 598
             D + ++ QVMDVV  HFRPEFLNR+DE ++FH LGQEH+  I  IQ+AR+ + L +R 
Sbjct: 731 RLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERD 790

Query: 599 ITLDLTEAAERWLGRIAYDPVYGARPLKRAVQRYLQDPLAEKLLAGEIPDGARVRIDEGD 658
             L++ + A   +  + +DPVYGARPLKRA+Q+ +++PLA+ +LAG+   G+ + +   D
Sbjct: 791 YQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAGKFLPGSPILLSVKD 850

Query: 659 DGL 661
             +
Sbjct: 851 GNI 853



 Score = 26.9 bits (58), Expect = 0.004
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 25/77 (32%)

Query: 598 KITLDLTEAAERWLGRIAYDPVYGARPLKRAVQRYLQ---------------------DP 636
           K T+DLTE AE+  G++  DPV G     R   + LQ                     + 
Sbjct: 163 KFTIDLTERAEQ--GKL--DPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEG 218

Query: 637 LAEKLLAGEIPDGARVR 653
           LA++++  E+P+G R R
Sbjct: 219 LAQRIINNEVPEGLRGR 235