Pairwise Alignments

Query, 224 a.a., DnaJ-class molecular chaperone CbpA from Sphingobium sp. HT1-2

Subject, 380 a.a., molecular chaperone DnaJ from Paraburkholderia bryophila 376MFSha3.1

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 68/196 (34%), Positives = 88/196 (44%), Gaps = 36/196 (18%)

Query: 5   YEKLGVAPSASAEEIQKAYRKLAKKLHPDLNPGDKAAEDKFKDVAGAYDLLSDADKRRRY 64
           YE LGVA +AS +EI+KAYRKLA K HPD NPG+K AE+ FK+V  AY++LSD+ KR  Y
Sbjct: 7   YEVLGVAKNASDDEIKKAYRKLAMKHHPDRNPGNKDAEEHFKEVKEAYEMLSDSQKRAAY 66

Query: 65  DAGEIDETGAERPPQQFYRDYAGSDFGRYASDAGYADFGGNDDVFADLF----------- 113
           D                   Y  +        AG   FGG  D F D+F           
Sbjct: 67  D------------------QYGHAGVDPNMGGAGAQGFGGFADAFGDIFGDIFGQAAGGA 108

Query: 114 RRNAEARAN---RRGQDLLYRLAISFADSVTGVSQRLTLPGGGTLDVT----IPPGILDG 166
            R    RA     RG DL Y + I+   +  G   ++ +P   + +V       PG    
Sbjct: 109 ARGGGGRAGPQVYRGADLRYSMEITLEQAAHGYDTQIRVPSWVSCEVCHGSGAKPGTKPE 168

Query: 167 QTLRLKGKGAAGMGKG 182
                 G GA  M +G
Sbjct: 169 TCPTCSGSGAVRMSQG 184



 Score = 56.6 bits (135), Expect = 6e-13
 Identities = 27/59 (45%), Positives = 35/59 (59%)

Query: 154 TLDVTIPPGILDGQTLRLKGKGAAGMGKGGPGDALIEIEVKPDARFTRDGDDITIDLPI 212
           TL+V IP GI DG  +R  G G  G+  G  GD  +EI +K  + F RDGDD+   +PI
Sbjct: 220 TLEVKIPAGIDDGMRIRSAGNGEPGINGGPSGDLYVEIHIKQHSVFERDGDDLHCQMPI 278



 Score = 47.4 bits (111), Expect = 4e-10
 Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 6/125 (4%)

Query: 86  AGSDFGRYASDAGYADFGGNDDVFADLFRR---NAEARANRRGQDLLYRLAISFADSVTG 142
           AG D G     AG  + G N     DL+        +   R G DL  ++ I F  +  G
Sbjct: 227 AGIDDGMRIRSAGNGEPGINGGPSGDLYVEIHIKQHSVFERDGDDLHCQMPIPFTTAALG 286

Query: 143 VSQRL-TLPGGGTLDVTIPPGILDGQTLRLKGKGAAGMGKGGPGDALIEIEVKPDARFTR 201
               + TL G  +   T+P G   G+T RL+GKG  G+     GD  + ++V+   + T 
Sbjct: 287 GEIEVPTLAGRASF--TVPEGTQSGKTFRLRGKGIKGLRSSIAGDLYVHVQVETPVKLTE 344

Query: 202 DGDDI 206
              D+
Sbjct: 345 PQRDL 349