Pairwise Alignments

Query, 675 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

 Score = 45.1 bits (105), Expect = 1e-08
 Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 38/159 (23%)

Query: 15  AQDATDVIEVVGKRTEETLKIDRRTYQ--VRETPNSAQ------------KNAVQLLRGL 60
           AQDAT        +T+ET+ +    Y   ++  P S              ++    L+ +
Sbjct: 25  AQDAT--------KTDETMVVTAAGYAQVIQNAPASISVISREDLESRYYRDVTDALKSV 76

Query: 61  PAVTIT-----PDDRILVLGSGLTRIYVDGRPYIGDASQYLRTVHGSD---------IER 106
           P VT+T      D  I  +GS  T I VDG+      ++      G +         IER
Sbjct: 77  PGVTVTGGGDTTDISIRGMGSNYTLILVDGKRQTSRQTRPNSDGPGIEQGWLPPLQAIER 136

Query: 107 IEVITNP-SAQFSSEGAGGIINLVLRKSRVEGLSGNASL 144
           IEVI  P S  + S+  GG+IN++ RK + +  SGN  L
Sbjct: 137 IEVIRGPMSTLYGSDAIGGVINIITRKDQ-QQWSGNVQL 174



 Score = 27.7 bits (60), Expect = 0.002
 Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 9/129 (6%)

Query: 472 GNPRLKDQSTNAYEASVQFRPGK-IELGATAYLRETSRLWSK--------SYSLNATGTS 522
           GNP LK +++   E S+ +  G  +    TA+  +     ++        +   N  G +
Sbjct: 443 GNPDLKPETSINKELSLMYSTGSGLAASLTAFHNDFKDKITRVACPANICTAGPNQWGAA 502

Query: 523 VYSYVNAGKSWSNGAQFDLAFPIVPRLKASASANLFNERTPVDMTDGQNMQRTFRYTANG 582
               VN  ++ + GA+  L+ PI   ++ S+S    +         G+ + +  ++  N 
Sbjct: 503 PTYRVNIDEAETYGAEATLSLPITESVELSSSYTYTHSEQKSGNFAGRPLLQLPKHLFNA 562

Query: 583 TFEWNGKDR 591
              W   DR
Sbjct: 563 NLSWQTTDR 571