Pairwise Alignments

Query, 370 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 400 a.a., Predicted acyl-CoA transferases/carnitine dehydratase from Pseudomonas stutzeri RCH2

 Score =  105 bits (262), Expect = 2e-27
 Identities = 101/383 (26%), Positives = 171/383 (44%), Gaps = 42/383 (10%)

Query: 4   LAGLVIVETAERVAGEFAARLLADFGAEVIKVEAPG-GAPTRAMGPFHEGQSTLFRYLNS 62
           L GL ++E  + +AG FA++LL +FGA+VIK+E P  G P R      +G S  +   + 
Sbjct: 11  LQGLKVIEMGQLIAGPFASKLLGEFGADVIKIEPPKVGDPLRKWRKLKDGTSLWWHVQSR 70

Query: 63  NKKSVLLDLEAPQDRALIDRLLARADALIDDHGPDWAAQHGLALGS----QPDIVHCAIT 118
           NK+SV LDL+A + +A++ +L+A AD L+++  P    + GL         P ++   I+
Sbjct: 71  NKRSVTLDLKAAEGQAIVRQLVAEADILVENFRPGTLEEWGLGWDELSKLNPRLIMLRIS 130

Query: 119 PFGQDAP----PHWQIARPINVMNAGGWAWHTPSESAPDRPPLMGAGRFMSDYEAGLEAA 174
            +GQ  P    P + +     +  A G   H      P +PP+   G  + D  + L   
Sbjct: 131 GYGQTGPYRDLPGFGV-----IGEAMGGLRHL--SGYPGQPPVR-VGVSIGDSLSSLYGV 182

Query: 175 LCTAASLLRKRRTGMGQAIDISEVAVQLSRADCVLG--------RMLAGDAEPGPERTRY 226
           +    +L  + R+G GQ ID++      +  + ++         R  AG A PG      
Sbjct: 183 IGVLLALQERNRSGQGQEIDVALYESVFAMMESLVPEYDAFGYVREPAGSALPGIT---- 238

Query: 227 DMGGPGAAFACAHG-HVYLLMTTRAHWRGLCALMGDRDWADAFPEDWLEYHCTRDRVAD- 284
               P  ++ C  G +V +     + ++ L  LMG +D AD   +    ++  R + A+ 
Sbjct: 239 ----PSNSYPCNDGAYVLIAGNGDSIYKRLMTLMGRQDLAD---DPRFAHNDGRAQHAEL 291

Query: 285 FRRHFRAWIATQAKDAVAQAAQQAGVPLVQVNSAADLIDHVQYRHRGFFQSL----GDAL 340
                  W     +D V +A + A VP     +AAD++    Y  R   + +    G   
Sbjct: 292 IDAAIGEWTIQHGRDEVIEALKGARVPAGYPYTAADIVKDPHYLARQMIEQVQTFAGPLK 351

Query: 341 HPTVPYRMSGSPVRLHSPAPAAG 363
            P V  ++S +P R+    P  G
Sbjct: 352 VPGVLPKLSRTPGRIGEGGPQLG 374