Pairwise Alignments

Query, 497 a.a., Copper/silver efflux RND transporter, membrane fusion protein CusB from Sphingobium sp. HT1-2

Subject, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 79.0 bits (193), Expect = 3e-19
 Identities = 80/336 (23%), Positives = 133/336 (39%), Gaps = 29/336 (8%)

Query: 94  DPSASQALGMRTVAVRRGELASSLTATGTIDFNQR-----------DVAIVQARAGGFVS 142
           +P+   A+ + T +V+  +++ SL+  G +   Q            D+  VQA       
Sbjct: 25  EPNQPPAISVVTESVQSQQISQSLSVVGKLKAEQSVDIAAEVAGKVDMIAVQANQQVKKG 84

Query: 143 RVYGRAPGDVIGAGAPLADVLVPEWGGAQTEF--LAVRRTGNAALIQAARQRLML----L 196
           ++  +   D   A    A   + +     TE+  L  R       I A R R+ +    L
Sbjct: 85  QILIKLDDDKAQAALVEAKAYLQDEQRKLTEYERLLKRNAITPTEIDAQRARVEIGQARL 144

Query: 197 GMPSGTIASVEQTGRPHNVITISTPTGGVIKTLNVRGGMTLMAGQTLAEVNGLGTVWLNA 256
                 +A +           I+ P  G +  ++   G  + AG  L  ++ L  + L+ 
Sbjct: 145 NAAQANLADLH----------ITAPFDGTVGFIDFSRGKWVSAGSELLTLDNLSLMRLDL 194

Query: 257 AVPEAVAGPLKPGQAVRAALAAFPGETISGRVSAILPETQADSRTLTVRIELPNRGGRLR 316
            +PE     L  G  V+ +  A+P     G V A+      ++  L VR+  PN   RL+
Sbjct: 195 QIPERYLPQLSKGMKVQGSSEAWPNVQFEGSVVAVDSRINQETLNLRVRVHFPNPDQRLK 254

Query: 317 PGMFATVSFGGSAQPALLVPSEALIRTGKRTLVMLALDKGRYRPAEVQTGREAGDDTEIL 376
           PGM  +      A  A ++P +AL  +G +  V +  +    +  EV  G    +   I 
Sbjct: 255 PGMLMSARIHFPAISAPIIPVQALEYSGTKRFVYVIGEDNVAKRREVSLGARVENQVVIE 314

Query: 377 AGLSEGEKIVASGQFLIDSEASLS--GVEARPIGAD 410
            GL  GEKIV  G   +   A +S   VE RP+  D
Sbjct: 315 KGLQIGEKIVVQGIVNMRDNARVSEVTVEGRPLKKD 350